עקוב אחר
Lauren McIver
Lauren McIver
כתובת אימייל מאומתת בדומיין vt.edu
כותרת
צוטט על ידי
צוטט על ידי
שנה
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature biotechnology 37 (8), 852-857, 2019
176102019
Gut microbiome structure and metabolic activity in inflammatory bowel disease
EA Franzosa, A Sirota-Madi, J Avila-Pacheco, N Fornelos, HJ Haiser, ...
Nature microbiology 4 (2), 293-305, 2019
16102019
Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3
F Beghini, LJ McIver, A Blanco-Míguez, L Dubois, F Asnicar, S Maharjan, ...
elife 10, e65088, 2021
15182021
Multivariable association discovery in population-scale meta-omics studies
H Mallick, A Rahnavard, LJ McIver, S Ma, Y Zhang, LH Nguyen, TL Tickle, ...
PLoS computational biology 17 (11), e1009442, 2021
15032021
Species-level functional profiling of metagenomes and metatranscriptomes
EA Franzosa, LJ McIver, G Rahnavard, LR Thompson, M Schirmer, ...
Nature methods 15 (11), 962-968, 2018
14632018
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ...
PeerJ Preprints, 2018
10442018
Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4
A Blanco-Míguez, F Beghini, F Cumbo, LJ McIver, KN Thompson, M Zolfo, ...
Nature Biotechnology 41 (11), 1633-1644, 2023
5452023
Dynamics of metatranscription in the inflammatory bowel disease gut microbiome
M Schirmer, EA Franzosa, J Lloyd-Price, LJ McIver, R Schwager, ...
Nature microbiology 3 (3), 337-346, 2018
5372018
bioBakery: a meta’omic analysis environment
LJ McIver, G Abu-Ali, EA Franzosa, R Schwager, XC Morgan, L Waldron, ...
Bioinformatics 34 (7), 1235-1237, 2018
3172018
Transcriptional profile of isoproterenol-induced cardiomyopathy and comparison to exercise-induced cardiac hypertrophy and human cardiac failure
CL Galindo, MA Skinner, M Errami, LD Olson, DA Watson, J Li, ...
BMC physiology 9, 1-22, 2009
1322009
Gut microbiome structure and metabolic activity in inflammatory bowel disease. Nat Microbiol 4: 293–305
EA Franzosa, A Sirota-Madi, J Avila-Pacheco, N Fornelos, HJ Haiser, ...
802019
Discovery of bioactive microbial gene products in inflammatory bowel disease
Y Zhang, A Bhosle, S Bae, LJ McIver, G Pishchany, EK Accorsi, ...
Nature 606 (7915), 754-760, 2022
662022
Divergence of Drosophila melanogaster repeatomes in response to a sharp microclimate contrast in Evolution Canyon, Israel
YB Kim, JH Oh, LJ McIver, E Rashkovetsky, K Michalak, HR Garner, ...
Proceedings of the National Academy of Sciences 111 (29), 10630-10635, 2014
552014
Evaluation of microsatellite variation in the 1000 Genomes Project pilot studies is indicative of the quality and utility of the raw data and alignments
LJ McIver, JW Fondon III, MA Skinner, HR Garner
Genomics 97 (4), 193-199, 2011
482011
Author Correction: Gut microbiome structure and metabolic activity in inflammatory bowel disease.
EA Franzosa, A Sirota-Madi, J Avila-Pacheco, N Fornelos, HJ Haiser, ...
Nature Microbiology 4 (5), 898-898, 2019
462019
High-sensitivity pattern discovery in large, paired multiomic datasets
AR Ghazi, K Sucipto, A Rahnavard, EA Franzosa, LJ McIver, J Lloyd-Price, ...
Bioinformatics 38 (Supplement_1), i378-i385, 2022
422022
Nicotine and oxidative stress induced exomic variations are concordant and overrepresented in cancer-associated genes
JH Bavarva, H Tae, L McIver, HR Garner
Oncotarget 5 (13), 4788, 2014
382014
Intestinal Blastocystis is linked to healthier diets and more favorable cardiometabolic outcomes in 56,989 individuals from 32 countries
E Piperni, LH Nguyen, P Manghi, H Kim, E Pasolli, S Andreu-Sánchez, ...
Cell 187 (17), 4554-4570. e18, 2024
322024
Microsatellite genotyping reveals a signature in breast cancer exomes
LJ McIver, NC Fonville, E Karunasena, HR Garner
Breast cancer research and treatment 145, 791-798, 2014
312014
Alterations in the gut microbiome implicate key taxa and metabolic pathways across inflammatory arthritis phenotypes
KN Thompson, KS Bonham, NE Ilott, GJ Britton, P Colmenero, SJ Bullers, ...
Science translational medicine 15 (706), eabn4722, 2023
302023
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מאמרים 1–20