| Sexual-dimorphism in human immune system aging EJ Márquez, C Chung, R Marches, RJ Rossi, D Nehar-Belaid, A Eroglu, ... Nature communications 11 (1), 751, 2020 | 462 | 2020 |
| AMULET: a novel read count-based method for effective multiplet detection from single nucleus ATAC-seq data A Thibodeau, A Eroglu, CS McGinnis, N Lawlor, D Nehar-Belaid, ... Genome biology 22, 1-19, 2021 | 73 | 2021 |
| CoRE-ATAC: A Deep Learning model for the functional Classification of Regulatory Elements from single cell and bulk ATAC-seq data A Thibodeau, S Khetan, A Eroglu, R Tewhey, ML Stitzel, D Ucar PLOS Computational Biology 17 (12), e1009670, 2021 | 12 | 2021 |
| NIPMAP: niche-phenotype mapping of multiplex histology data by community ecology A El Marrahi, F Lipreri, Z Kang, L Gsell, A Eroglu, D Alber, J Hausser Nature Communications 14 (1), 7182, 2023 | 7 | 2023 |
| Diffusion Smart-seq3 of breast cancer spheroids to explore spatial tumor biology and test evolutionary principles of tumor heterogeneity A Cougnoux, L Mahmoud, P Johnsson, L Gsell, J Rosenbauer, A Eroglu, ... | | 2024 |