עקוב אחר
Siewert J. Marrink
Siewert J. Marrink
Professor of Molecular Dynamics, University of Groningen
כתובת אימייל מאומתת בדומיין rug.nl - דף הבית
כותרת
צוטט על ידי
צוטט על ידי
שנה
The MARTINI force field: coarse grained model for biomolecular simulations‏
SJ Marrink, HJ Risselada, S Yefimov, DP Tieleman, AH De Vries‏
The Journal of Physical Chemistry B 111 (27), 7812-7824, 2007‏
61722007
The MARTINI coarse-grained force field: extension to proteins‏
L Monticelli, SK Kandasamy, X Periole, RG Larson, DP Tieleman, ...‏
Journal of Chemical Theory and Computation 4 (5), 819-834, 2008‏
28342008
Coarse grained model for semiquantitative lipid simulations‏
SJ Marrink, AH De Vries, AE Mark‏
The Journal of Physical Chemistry B 108 (2), 750-760, 2004‏
26532004
Improved parameters for the MARTINI coarse-grained protein force field‏
DH de Jong, G Singh, WFD Bennett, C Arnarez, TA Wassenaar, ...‏
Journal of Chemical Theory and Computation 9 (1), 687-697, 2013‏
14892013
Perspective on the MARTINI model‏
SJ Marrink, DP Tieleman‏
Chemical Society Reviews 42 (16), 6801-6822, 2013‏
13042013
Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations‏
TA Wassenaar, HI Ingólfsson, RA Bockmann, DP Tieleman, SJ Marrink‏
Journal of chemical theory and computation 11 (5), 2144-2155, 2015‏
11022015
A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems‏
DP Tieleman, SJ Marrink, HJC Berendsen‏
Biochimica et Biophysica Acta (BBA)-Reviews on Biomembranes 1331 (3), 235-270, 1997‏
10311997
Polarizable water model for the coarse-grained MARTINI force field‏
SO Yesylevskyy, LV Schäfer, D Sengupta, SJ Marrink‏
PLoS computational biology 6 (6), e1000810, 2010‏
9902010
Simulation of water transport through a lipid membrane‏
SJ Marrink, HJC Berendsen‏
The Journal of Physical Chemistry 98 (15), 4155-4168, 1994‏
9861994
Lipid organization of the plasma membrane‏
HI Ingólfsson, MN Melo, FJ Van Eerden, C Arnarez, CA Lopez, ...‏
Journal of the American Chemical Society 136 (41), 14554-14559, 2014‏
9772014
Martini 3: a general purpose force field for coarse-grained molecular dynamics‏
PCT Souza, R Alessandri, J Barnoud, S Thallmair, I Faustino, ...‏
Nature Methods 18, 382–388, 2021‏
9382021
Combining an elastic network with a coarse-grained molecular force field: structure, dynamics, and intermolecular recognition‏
X Periole, M Cavalli, SJ Marrink, MA Ceruso‏
Journal of chemical theory and computation 5 (9), 2531-2543, 2009‏
7442009
Going backward: A flexible geometric approach to reverse transformation from coarse grained to atomistic models‏
TA Wassenaar, K Pluhackova, RA Böckmann, SJ Marrink, DP Tieleman‏
Journal of Chemical Theory and Computation 10, 676-690, 2014‏
7202014
Toroidal pores formed by antimicrobial peptides show significant disorder‏
D Sengupta, H Leontiadou, AE Mark, SJ Marrink‏
Biochimica et Biophysica Acta (BBA)-Biomembranes 1778 (10), 2308-2317, 2008‏
6912008
Computational Modeling of Realistic Cell Membranes‏
SJ Marrink, V Corradi, PCT Souza, HI Ingólfsson, DP Tieleman, ...‏
Chemical Reviews 119 (9), 6184–6226, 2019‏
6582019
The molecular face of lipid rafts in model membranes‏
HJ Risselada, SJ Marrink‏
Proceedings of the National Academy of Sciences 105 (45), 17367-17372, 2008‏
6572008
The power of coarse graining in biomolecular simulations‏
HI Ingólfsson, CA Lopez, JJ Uusitalo, DH Jong, SM Gopal, X Periole, ...‏
Wiley Interdisciplinary Reviews: Computational Molecular Science 4 (3), 225–248, 2014‏
6522014
Antimicrobial peptides in action‏
H Leontiadou, AE Mark, SJ Marrink‏
Journal of the American Chemical Society 128 (37), 12156-12161, 2006‏
5682006
Simulation of pore formation in lipid bilayers by mechanical stress and electric fields‏
DP Tieleman, H Leontiadou, AE Mark, SJ Marrink‏
Journal of the American Chemical Society 125 (21), 6382-6383, 2003‏
5592003
Permeation process of small molecules across lipid membranes studied by molecular dynamics simulations‏
SJ Marrink, HJC Berendsen‏
The Journal of Physical Chemistry 100 (41), 16729-16738, 1996‏
5501996
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מאמרים 1–20