| Simplified and representative bacterial community of maize roots B Niu, JN Paulson, X Zheng, R Kolter Proceedings of the National Academy of Sciences 114 (12), E2450-E2459, 2017 | 635 | 2017 |
| Predicting anticancer drug responses using a dual-layer integrated cell line-drug network model N Zhang, H Wang, Y Fang, J Wang, X Zheng, XS Liu PLoS computational biology 11 (9), e1004498, 2015 | 193 | 2015 |
| Anticancer drug sensitivity prediction in cell lines from baseline gene expression through recursive feature selection Z Dong, N Zhang, C Li, H Wang, Y Fang, J Wang, X Zheng BMC cancer 15, 1-12, 2015 | 168 | 2015 |
| Landscape of B cell immunity and related immune evasion in human cancers X Hu, J Zhang, J Wang, J Fu, T Li, X Zheng, B Wang, S Gu, P Jiang, J Fan, ... Nature genetics 51 (3), 560-567, 2019 | 151 | 2019 |
| Prediction of protein structural class for low-similarity sequences using support vector machine and PSI-BLAST profile T Liu, X Zheng, J Wang Biochimie 92 (10), 1330-1334, 2010 | 148 | 2010 |
| Estimating and accounting for tumor purity in the analysis of DNA methylation data from cancer studies X Zheng, N Zhang, HJ Wu, H Wu Genome biology 18, 1-14, 2017 | 131 | 2017 |
| The nuclear matrix protein HNRNPU maintains 3D genome architecture globally in mouse hepatocytes H Fan, P Lv, X Huo, J Wu, Q Wang, L Cheng, Y Liu, QQ Tang, L Zhang, ... Genome research 28 (2), 192-202, 2018 | 113 | 2018 |
| Accurate prediction of protein structural class using auto covariance transformation of PSI-BLAST profiles T Liu, X Geng, X Zheng, R Li, J Wang Amino acids 42, 2243-2249, 2012 | 112 | 2012 |
| Snail1-dependent p53 repression regulates expansion and activity of tumour-initiating cells in breast cancer T Ni, XY Li, N Lu, T An, ZP Liu, R Fu, WC Lv, YW Zhang, XJ Xu, ... Nature cell biology 18 (11), 1221-1232, 2016 | 107 | 2016 |
| MethylPurify: tumor purity deconvolution and differential methylation detection from single tumor DNA methylomes X Zheng, Q Zhao, HJ Wu, W Li, H Wang, CA Meyer, QA Qin, H Xu, C Zang, ... Genome biology 15, 1-13, 2014 | 100 | 2014 |
| The intratumor mycobiome promotes lung cancer progression via myeloid-derived suppressor cells NN Liu, CX Yi, LQ Wei, JA Zhou, T Jiang, CC Hu, L Wang, YY Wang, ... Cancer cell 41 (11), 1927-1944. e9, 2023 | 83 | 2023 |
| Prediction of subcellular location of apoptosis proteins using pseudo amino acid composition: an approach from auto covariance transformation T Liu, X Zheng, C Wang, J Wang Protein and peptide letters 17 (10), 1263-1269, 2010 | 81 | 2010 |
| An ensemble classifier for eukaryotic protein subcellular location prediction using gene ontology categories and amino acid hydrophobicity L Li, Y Zhang, L Zou, C Li, B Yu, X Zheng, Y Zhou PLoS One 7 (1), e31057, 2012 | 80 | 2012 |
| InfiniumPurify: an R package for estimating and accounting for tumor purity in cancer methylation research Y Qin, H Feng, M Chen, H Wu, X Zheng Genes & diseases 5 (1), 43-45, 2018 | 75 | 2018 |
| Prediction of bacterial protein subcellular localization by incorporating various features into Chou's PseAAC and a backward feature selection approach L Li, S Yu, W Xiao, Y Li, M Li, L Huang, X Zheng, S Zhou, H Yang Biochimie 104, 100-107, 2014 | 73 | 2014 |
| Prediction of protein subcellular multi-localization based on the general form of Chou's pseudo amino acid composition LQ Li, Y Zhang, LY Zou, Y Zhou, XQ Zheng Protein and Peptide Letters 19 (4), 375-387, 2012 | 72 | 2012 |
| Predicting subcellular location of apoptosis proteins with pseudo amino acid composition: approach from amino acid substitution matrix and auto covariance transformation X Yu, X Zheng, T Liu, Y Dou, J Wang Amino acids 42, 1619-1625, 2012 | 67 | 2012 |
| A systematic study on drug-response associated genes using baseline gene expressions of the Cancer Cell Line Encyclopedia X Liu, J Yang, Y Zhang, Y Fang, F Wang, J Wang, X Zheng, J Yang Scientific reports 6 (1), 22811, 2016 | 65 | 2016 |
| ERCC6L2 promotes DNA orientation-specific recombination in mammalian cells X Liu, T Liu, Y Shang, P Dai, W Zhang, BJ Lee, M Huang, D Yang, Q Wu, ... Cell research 30 (9), 732-744, 2020 | 56 | 2020 |
| Comprehensive anticancer drug response prediction based on a simple cell line-drug complex network model D Wei, C Liu, X Zheng, Y Li BMC bioinformatics 20, 1-15, 2019 | 54 | 2019 |
Xiaole Shirley LiuCEO, GV20 Therapeuticsכתובת אימייל מאומתת בדומיין ds.dfci.harvard.edu