Spatial multi-omic map of human myocardial infarction C Kuppe, RO Ramirez Flores, Z Li, S Hayat, RT Levinson, X Liao, ... Nature 608 (7924), 766-777, 2022 | 399 | 2022 |
Chromatin-accessibility estimation from single-cell ATAC-seq data with scOpen Z Li, C Kuppe, S Ziegler, M Cheng, N Kabgani, S Menzel, M Zenke, ... Nature communications 12 (1), 6386, 2021 | 81 | 2021 |
Next-generation morphometry for pathomics-data mining in histopathology DL Hölscher, N Bouteldja, M Joodaki, ML Russo, YC Lan, AV Sadr, ... Nature communications 14 (1), 470, 2023 | 70 | 2023 |
Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT) M Joodaki, M Shaigan, V Parra, RD Bülow, C Kuppe, DL Hölscher, ... Molecular systems biology 20 (2), 57-74, 2024 | 18 | 2024 |
MOJITOO: a fast and universal method for integration of multimodal single-cell data M Cheng, Z Li, IG Costa Bioinformatics 38 (Supplement_1), i282-i289, 2022 | 13 | 2022 |
Chromatin-accessibility estimation from single-cell ATAC data with scOpen Z Li, C Kuppe, S Ziegler, M Cheng, N Kabgani, S Menzel, M Zenke, ... BioRxiv, 865931, 2019 | 9 | 2019 |
Mapping cardiac remodeling in chronic kidney disease N Kaesler, M Cheng, J Nagai, J O’Sullivan, F Peisker, EMJ Bindels, ... Science Advances 9 (47), eadj4846, 2023 | 2 | 2023 |
Next-Generation Morphometry for pathomics-data mining in histopathology P Boor, D Hölscher, N Bouteldja, M Joodaki, M Russo, YC Lan, A Sadr, ... | 2 | 2022 |
Deciphering the complex clonal heterogeneity of polycythemia vera and the response to interferon alpha M Kalmer, M Grasshoff, T Maié, K Pannen, MAS Toledo, M Vieri, ... Blood Advances, 2025 | 1 | 2025 |
Lineage tracing reveals transient phenotypic adaptation of tubular cells during acute kidney injury M Buse, M Cheng, V Jankowski, M Lellig, V Sterzer, T Strieder, K Leuchtle, ... Iscience 27 (3), 2024 | 1 | 2024 |
PHLOWER-Single cell trajectory analysis using Decomposition of the Hodge Laplacian M Cheng, J Jansen, K Reimer, JS Nagai, Z Li, P Kiessling, M Grasshoff, ... bioRxiv, 2024.10. 01.613179, 2024 | | 2024 |
y LINEAGE TRACING OF REGENERATING PROXIMAL TUBULE CELLS (STC) BY SINGLE CELL PROFILING IN ACUTE KIDNEY INJURY E Stamellou, M Cheng, V Sterzer, K Leuchtle, T Strieder, P Boor, J Floege, ... NEPHROLOGY DIALYSIS TRANSPLANTATION 36, 237-237, 2021 | | 2021 |
MO331 LINEAGE TRACING OF REGENERATING PROXIMAL TUBULE CELLS (STC) BY SINGLE CELL PROFILING IN ACUTE KIDNEY INJURY E Stamellou, M Cheng, V Sterzer, K Leuchtle, T Strieder, P Boor, J Floege, ... Nephrology Dialysis Transplantation 36 (Supplement_1), gfab084. 004, 2021 | | 2021 |
scOpen: chromatin-accessibility estimation of Z Li, C Kuppe, M Cheng, S Menzel, M Zenke, R Kramann, IG Costa | | |