Steered molecular dynamics and mechanical functions of proteins B Isralewitz, M Gao, K Schulten Current opinion in structural biology 11 (2), 224-230, 2001 | 1247 | 2001 |
Unfolding of titin immunoglobulin domains by steered molecular dynamics simulation H Lu, B Isralewitz, A Krammer, V Vogel, K Schulten Biophysical journal 75 (2), 662-671, 1998 | 844 | 1998 |
Steered molecular dynamics S Izrailev, S Stepaniants, B Isralewitz, D Kosztin, H Lu, F Molnar, ... Computational Molecular Dynamics: Challenges, Methods, Ideas: Proceedings of …, 1999 | 606 | 1999 |
Steered molecular dynamics investigations of protein function B Isralewitz, J Baudry, J Gullingsrud, D Kosztin, K Schulten Journal of Molecular Graphics and Modelling 19 (1), 13-25, 2001 | 442 | 2001 |
Forced unfolding of the fibronectin type III module reveals a tensile molecular recognition switch A Krammer, H Lu, B Isralewitz, K Schulten, V Vogel Proceedings of the National Academy of Sciences 96 (4), 1351-1356, 1999 | 357 | 1999 |
Binding pathway of retinal to bacterio-opsin: a prediction by molecular dynamics simulations B Isralewitz, S Izrailev, K Schulten Biophysical journal 73 (6), 2972-2979, 1997 | 197 | 1997 |
Atoms to phenotypes: molecular design principles of cellular energy metabolism A Singharoy, C Maffeo, KH Delgado-Magnero, DJK Swainsbury, M Sener, ... Cell 179 (5), 1098-1111. e23, 2019 | 167 | 2019 |
Computational Molecular Dynamics: Challenges, Methods S Izrailev, S Stepaniants, B Isralewitz, D Kosztin, H Lu, F Molnar, ... Ideas 4, 39, 1998 | 88 | 1998 |
Large scale simulation of protein mechanics and function E Tajkhorshid, A Aksimentiev, I Balabin, M Gao, B Isralewitz, JC Phillips, ... Advances in protein chemistry 66, 195-247, 2003 | 61 | 2003 |
GPU-accelerated analysis and visualization of large structures solved by molecular dynamics flexible fitting JE Stone, R McGreevy, B Isralewitz, K Schulten Faraday discussions 169, 265-283, 2014 | 51 | 2014 |
Atomic detail visualization of photosynthetic membranes with GPU-accelerated ray tracing JE Stone, M Sener, KL Vandivort, A Barragan, A Singharoy, I Teo, ... Parallel Computing 55, 17-27, 2016 | 45 | 2016 |
Computer modeling of force-induced titin domain unfolding H Lu, A Krammer, B Isralewitz, V Vogel, K Schulten Elastic filaments of the cell, 143-162, 2000 | 40 | 2000 |
Domain Motion of Individual F1-ATPase β-Subunits during Unbiased Molecular Dynamics Simulations U Kleinekathöfer, B Isralewitz, M Dittrich, K Schulten The Journal of Physical Chemistry A 115 (25), 7267-7274, 2011 | 29 | 2011 |
Early experiences scaling VMD molecular visualization and analysis jobs on Blue Waters JE Stone, B Isralewitz, K Schulten 2013 Extreme Scaling Workshop (xsw 2013), 43-50, 2013 | 26 | 2013 |
Visualization of energy conversion processes in a light harvesting organelle at atomic detail M Sener, JE Stone, A Barragan, A Singharoy, I Teo, KL Vandivort, ... Proceedings of the International Conference on High Performance Computing …, 2014 | 17 | 2014 |
Multiscale modeling and cinematic visualization of photosynthetic energy conversion processes from electronic to cell scales M Sener, S Levy, JE Stone, AJ Christensen, B Isralewitz, R Patterson, ... Parallel computing 102, 102698, 2021 | 16 | 2021 |
GPU Algorithms for Molecular Modeling. JE Stone, DJ Hardy, B Isralewitz, K Schulten Scientific computing with multicore and accelerators, 351-371, 2010 | 16 | 2010 |
Timeline: a VMD plugin for trajectory analysis B Isralewitz Mars, 2011 | 10 | 2011 |
Bioinformatics and sequence alignment F Autenrieth, B Isralewitz, Z Luthey-Schulten, A Sethi, T Pogorelov University of Illinois at Urbana-Champaign, 1-29, 2005 | 10 | 2005 |
Cybershuttle: An end-to-end cyberinfrastructure continuum to accelerate discovery in science and engineering S Marru, M Pierce, B Plale, S Pamidighantam, D Wannipurage, M Christie, ... Practice and Experience in Advanced Research Computing, 26-34, 2023 | 7 | 2023 |