| SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes W Sungnak, N Huang, C Bécavin, M Berg, R Queen, M Litvinukova, ... Nature medicine 26 (5), 681-687, 2020 | 2879 | 2020 |
| BBKNN: fast batch alignment of single cell transcriptomes K Polański, MD Young, Z Miao, KB Meyer, SA Teichmann, JE Park Bioinformatics 36 (3), 964-965, 2020 | 698 | 2020 |
| Decoding human fetal liver haematopoiesis DM Popescu, RA Botting, E Stephenson, K Green, S Webb, L Jardine, ... Nature 574 (7778), 365-371, 2019 | 525 | 2019 |
| A test metric for assessing single-cell RNA-seq batch correction M Büttner, Z Miao, FA Wolf, SA Teichmann, FJ Theis Nature methods 16 (1), 43-49, 2019 | 399 | 2019 |
| Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics C Muus, MD Luecken, G Eraslan, L Sikkema, A Waghray, G Heimberg, ... Nature medicine 27 (3), 546-559, 2021 | 340 | 2021 |
| RNA-Puzzles Round III: 3D RNA structure prediction of five riboswitches and one ribozyme Z Miao, RW Adamiak, M Antczak, RT Batey, AJ Becka, M Biesiada, ... Rna 23 (5), 655-672, 2017 | 200 | 2017 |
| RNA-Puzzles Round II: assessment of RNA structure prediction programs applied to three large RNA structures Z Miao, RW Adamiak, MF Blanchet, M Boniecki, JM Bujnicki, SJ Chen, ... Rna 21 (6), 1066-1084, 2015 | 197 | 2015 |
| RNA structure: advances and assessment of 3D structure prediction Z Miao, E Westhof Annual review of biophysics 46 (1), 483-503, 2017 | 196 | 2017 |
| Mutations in signal recognition particle SRP54 cause syndromic neutropenia with Shwachman-Diamond–like features R Carapito, M Konantz, C Paillard, Z Miao, A Pichot, MS Leduc, Y Yang, ... The Journal of clinical investigation 127 (11), 4090-4103, 2017 | 170 | 2017 |
| Secondary structure of the SARS-CoV-2 5’-UTR Z Miao, A Tidu, G Eriani, F Martin RNA biology 18 (4), 447-456, 2021 | 148 | 2021 |
| RNA-Puzzles Round IV: 3D structure predictions of four ribozymes and two aptamers Z Miao, RW Adamiak, M Antczak, MJ Boniecki, J Bujnicki, SJ Chen, ... Rna 26 (8), 982-995, 2020 | 136 | 2020 |
| Putative cell type discovery from single-cell gene expression data Z Miao, P Moreno, N Huang, I Papatheodorou, A Brazma, SA Teichmann Nature methods 17 (6), 621-628, 2020 | 114 | 2020 |
| Comparative analysis of sequencing technologies for single-cell transcriptomics KN Natarajan, Z Miao, M Jiang, X Huang, H Zhou, J Xie, C Wang, S Qin, ... Genome Biology 20, 1-8, 2019 | 114 | 2019 |
| Genome-wide analyses reveal the IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation J Pramanik, X Chen, G Kar, J Henriksson, T Gomes, JE Park, K Natarajan, ... Genome medicine 10, 1-19, 2018 | 88 | 2018 |
| RNA-Puzzles toolkit: a computational resource of RNA 3D structure benchmark datasets, structure manipulation, and evaluation tools M Magnus, M Antczak, T Zok, J Wiedemann, P Lukasiak, Y Cao, ... Nucleic acids research 48 (2), 576-588, 2020 | 79 | 2020 |
| A large-scale assessment of nucleic acids binding site prediction programs Z Miao, E Westhof PLoS computational biology 11 (12), e1004639, 2015 | 79 | 2015 |
| NCKAP1L defects lead to a novel syndrome combining immunodeficiency, lymphoproliferation, and hyperinflammation CN Castro, M Rosenzwajg, R Carapito, M Shahrooei, M Konantz, A Khan, ... Journal of Experimental Medicine 217 (12), e20192275, 2020 | 77 | 2020 |
| Advances in RNA 3D structure modeling using experimental data B Li, Y Cao, E Westhof, Z Miao Frontiers in genetics 11, 574485, 2020 | 76 | 2020 |
| RASP: rapid modeling of protein side chain conformations Z Miao, Y Cao, T Jiang Bioinformatics 27 (22), 3117-3122, 2011 | 74 | 2011 |
| Improved side-chain modeling by coupling clash-detection guided iterative search with rotamer relaxation Y Cao, L Song, Z Miao, Y Hu, L Tian, T Jiang Bioinformatics 27 (6), 785-790, 2011 | 71 | 2011 |