| Genomes of the mouse collaborative cross A Srivastava, AP Morgan, ML Najarian, VK Sarsani, JS Sigmon, ... Genetics 206 (2), 537-556, 2017 | 203 | 2017 |
| The genome of C57BL/6J “Eve”, the mother of the laboratory mouse genome reference strain VK Sarsani, N Raghupathy, IT Fiddes, J Armstrong, F Thibaud-Nissen, ... G3: Genes, Genomes, Genetics 9 (6), 1795-1805, 2019 | 68 | 2019 |
| Relationship between differential hepatic microRNA expression and decreased hepatic cytochrome P450 3A activity in cirrhosis R Vuppalanchi, T Liang, CP Goswami, R Nalamasu, L Li, D Jones, R Wei, ... PloS one 8 (9), e74471, 2013 | 46 | 2013 |
| Community-acquired rhinovirus infection is associated with changes in the airway microbiome KM Kloepfer, VK Sarsani, V Poroyko, WM Lee, TE Pappas, T Kang, ... Journal of Allergy and Clinical Immunology 140 (1), 312-315. e8, 2017 | 45 | 2017 |
| Genomic data analysis workflows for tumors from patient-derived xenografts (PDXs): challenges and guidelines XY Woo, A Srivastava, JH Graber, V Yadav, VK Sarsani, A Simons, ... BMC medical genomics 12, 1-19, 2019 | 38 | 2019 |
| Genome assembly and gene expression in the American black bear provides new insights into the renal response to hibernation A Srivastava, V Kumar Sarsani, I Fiddes, SM Sheehan, RL Seger, ... DNA Research 26 (1), 37-44, 2019 | 30 | 2019 |
| A hypermorphic Nfkbid allele contributes to impaired thymic deletion of autoreactive diabetogenic CD8+ T cells in NOD mice M Presa, JJ Racine, JR Dwyer, DJ Lamont, JJ Ratiu, VK Sarsani, ... The Journal of Immunology 201 (7), 1907-1917, 2018 | 19 | 2018 |
| Whole-genome sequence of sungri/96 vaccine strain of peste des petits ruminants virus M Siddappa, RK Gandham, V Sarsani, BP Mishra, B Mishra, CG Joshi, ... Genome announcements 2 (1), 10.1128/genomea. 00056-14, 2014 | 14 | 2014 |
| Esophageal microbiome in healthy children and esophageal eosinophilia KR Parashette, VK Sarsani, E Toh, SC Janga, DE Nelson, SK Gupta Journal of Pediatric Gastroenterology and Nutrition 74 (5), e109-e114, 2022 | 13* | 2022 |
| SCSIM: Jointly simulating correlated single-cell and bulk next-generation DNA sequencing data C Giguere, HV Dubey, VK Sarsani, H Saddiki, S He, P Flaherty BMC bioinformatics 21, 1-10, 2020 | 10 | 2020 |
| Model-based identification of conditionally-essential genes from transposon-insertion sequencing data V Sarsani, B Aldikacti, S He, R Zeinert, P Chien, P Flaherty PLOS Computational Biology 18 (3), e1009273, 2022 | 5 | 2022 |
| A Bayesian nonparametric model for inferring subclonal populations from structured DNA sequencing data S He, A Schein, V Sarsani, P Flaherty The annals of applied statistics 15 (2), 925, 2021 | 3 | 2021 |
| A cross-ancestry genome-wide meta-analysis, fine-mapping, and gene prioritization approach to characterize the genetic architecture of adiponectin V Sarsani, SM Brotman, Y Xianyong, LF Silva, M Laakso, CN Spracklen Human Genetics and Genomics Advances 5 (1), 2024 | 2* | 2024 |
| Mechanisms driving epigenetic and transcriptional responses of microglia in a neurodegenerative lysosomal storage disorder model CD Balak, JCM Schlachetzki, AJ Lana, E West, C Hong, J DuGal, Y Zhou, ... bioRxiv, 2024.11. 12.623296, 2024 | 2 | 2024 |
| Genome informatics AK Kesarwani, A Malhotra, A Srivastava, G Ananda, H Ashoor, P Kumar, ... Academic Press, 2019 | 2 | 2019 |
| Differential expression of miRNAs in nontumor liver tissue of patients with hepatocellular cancer caused by nonalcoholic steatohepatitis cirrhosis T Liang, NP Chalasani, KE Williams, V Sarasani, SC Janga, ... Clinical Gastroenterology and Hepatology 15 (3), 465-467, 2017 | 2 | 2017 |
| Discovering genetic modulators of the protein homeostasis system through multilevel analysis V Sarsani, B Aldikacti, T Zhao, S He, P Chien, P Flaherty PNAS nexus 4 (1), pgae574, 2025 | | 2025 |
| Brain phosphoproteomic analysis identifies diabetes‐related substrates in Alzheimer's disease pathology in older adults AW Capuano, V Sarsani, S Tasaki, RI Mehta, J Li, R Ahima, S Arnold, ... Alzheimer's & Dementia, 2024 | | 2024 |
| RNA Immunoprecipitation and Sequencing of Isolated RNAs (RIP-SIR) Identifies Endogenous miRNA-Target Interactions CJB Julie Wells , Anuj Srivastava , Richard S. Maser , Rupesh Kesharwani ... bioRxiv, 2022 | | 2022 |
| A Hypermorphic Allele Contributes to Impaired Thymic Deletion of Autoreactive Diabetogenic CD8 T Cells in NOD Mice. M Presa, JJ Racine, JR Dwyer, DJ Lamont, JJ Ratiu, VK Sarsani, ... American Association of Immunologists, 2018 | | 2018 |