| Long-read sequencing of an advanced cancer cohort resolves rearrangements, unravels haplotypes, and reveals methylation landscapes K O’Neill, E Pleasance, J Fan, V Akbari, G Chang, K Dixon, V Csizmok, ... Cell Genomics 4 (11), 2024 | 7 | 2024 |
| Genomic structures and regulation patterns at HPV integration sites in cervical cancer VL Porter, K O'Neill, S MacLennan, RD Corbett, M Ng, L Culibrk, ... bioRxiv, 2023.11. 04.564800, 2023 | 4 | 2023 |
| The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 G Chang, S Jones, S Leelakumari, J Ashkani, L Culibrk, K O'Neill, K Tse, ... F1000Research 12, 2023 | 3 | 2023 |
| IMPALA: A Comprehensive Pipeline for Detecting and Elucidating Mechanisms of Allele Specific Expression in Cancer G Chang, VL Porter, K O’Neill, L Culibrk, V Akbari, MA Marra, SJM Jones bioRxiv, 2023.09. 11.555771, 2023 | 1 | 2023 |
| Rearrangements of viral and human genomes at human papillomavirus integration events and their allele-specific impacts on cancer genome regulation VL Porter, M Ng, K O'Neill, S MacLennan, RD Corbett, L Culibrk, ... Genome Research, gr. 279041.124, 2024 | | 2024 |
| The genome sequence of the Loggerhead sea turtle, Caretta caretta Linnaeus 1758 [version 2; peer review: 2 G Chang, S Jones, S Leelakumari, J Ashkani, L Culibrk, K O'Neill, K Tse, ... | | 2023 |
| Integrating nanopore long-range genomic variant phasing to improve resolution of allele-specific expression from short-read RNA-seq KMG Chang University of British Columbia, 2023 | | 2023 |
