| InterPro in 2017—beyond protein family and domain annotations RD Finn, TK Attwood, PC Babbitt, A Bateman, P Bork, AJ Bridge, ... Nucleic acids research 45 (D1), D190-D199, 2017 | 1613 | 2017 |
| Metal ions in biological catalysis: from enzyme databases to general principles C Andreini, I Bertini, G Cavallaro, GL Holliday, JM Thornton JBIC Journal of Biological Inorganic Chemistry 13, 1205-1218, 2008 | 1340 | 2008 |
| The structure–function linkage database E Akiva, S Brown, DE Almonacid, AE Barber 2nd, AF Custer, MA Hicks, ... Nucleic acids research 42 (D1), D521-D530, 2014 | 271 | 2014 |
| The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes N Furnham, GL Holliday, TAP de Beer, JOB Jacobsen, WR Pearson, ... Nucleic acids research 42 (D1), D485-D489, 2014 | 211 | 2014 |
| Mechanism and Catalytic Site Atlas (M-CSA): a database of enzyme reaction mechanisms and active sites AJM Ribeiro, GL Holliday, N Furnham, JD Tyzack, K Ferris, JM Thornton Nucleic acids research 46 (D1), D618-D623, 2018 | 205 | 2018 |
| Small molecule subgraph detector (SMSD) toolkit SA Rahman, M Bashton, GL Holliday, R Schrader, JM Thornton Journal of cheminformatics 1, 1-13, 2009 | 196 | 2009 |
| Understanding the functional roles of amino acid residues in enzyme catalysis GL Holliday, JBO Mitchell, JM Thornton Journal of Molecular Biology 390 (3), 560-577, 2009 | 183 | 2009 |
| EC-BLAST: a tool to automatically search and compare enzyme reactions SA Rahman, SM Cuesta, N Furnham, GL Holliday, JM Thornton Nature methods 11 (2), 171-174, 2014 | 147 | 2014 |
| Atlas of the radical SAM superfamily: divergent evolution of function using a “plug and play” domain GL Holliday, E Akiva, EC Meng, SD Brown, S Calhoun, U Pieper, A Sali, ... Methods in enzymology 606, 1-71, 2018 | 135 | 2018 |
| A global analysis of function and conservation of catalytic residues in enzymes AJM Ribeiro, JD Tyzack, N Borkakoti, GL Holliday, JM Thornton Journal of Biological Chemistry 295 (2), 314-324, 2020 | 118 | 2020 |
| Reaction Decoder Tool (RDT): extracting features from chemical reactions SA Rahman, G Torrance, L Baldacci, S Martínez Cuesta, F Fenninger, ... Bioinformatics 32 (13), 2065-2066, 2016 | 103 | 2016 |
| Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies N Furnham, I Sillitoe, GL Holliday, AL Cuff, RA Laskowski, CA Orengo, ... PLoS computational biology 8 (3), e1002403, 2012 | 100 | 2012 |
| The structures and physicochemical properties of organic cofactors in biocatalysis JD Fischer, GL Holliday, SA Rahman, JM Thornton Journal of molecular biology 403 (5), 803-824, 2010 | 92 | 2010 |
| MACiE: exploring the diversity of biochemical reactions GL Holliday, C Andreini, JD Fischer, SA Rahman, DE Almonacid, ... Nucleic acids research 40 (D1), D783-D789, 2012 | 91 | 2012 |
| Metal-MACiE: a database of metals involved in biological catalysis C Andreini, I Bertini, G Cavallaro, GL Holliday, JM Thornton Bioinformatics 25 (16), 2088-2089, 2009 | 87 | 2009 |
| MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms GL Holliday, DE Almonacid, GJ Bartlett, NM O'Boyle, JW Torrance, ... Nucleic Acids Research 35 (suppl_1), D515-D520, 2007 | 85 | 2007 |
| The CoFactor database: organic cofactors in enzyme catalysis JD Fischer, GL Holliday, JM Thornton Bioinformatics 26 (19), 2496-2497, 2010 | 82 | 2010 |
| Evolution of enzymes and pathways for the biosynthesis of cofactors GL Holliday, JM Thornton, A Marquet, AG Smith, F Rébeillé, R Mendel, ... Natural Product Reports 24 (5), 972-987, 2007 | 80 | 2007 |
| Chemical markup, XML, and the world wide web. 6. CMLReact, an XML vocabulary for chemical reactions GL Holliday, P Murray-Rust, HS Rzepa Journal of chemical information and modeling 46 (1), 145-157, 2006 | 76 | 2006 |
| [FeFe]-hydrogenase maturation: insights into the role HydE plays in dithiomethylamine biosynthesis JN Betz, NW Boswell, CJ Fugate, GL Holliday, E Akiva, AG Scott, ... Biochemistry 54 (9), 1807-1818, 2015 | 66 | 2015 |
Janet M ThorntonSenior Scientist, European Molecular Biology Laboratory - European Institute of Bioinformatics (EMBL確認したメール アドレス: ebi.ac.uk