TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment D Sun, J Wang, Y Han, X Dong, J Ge, R Zheng, X Shi, B Wang, Z Li, ... Nucleic acids research 49 (D1), D1420-D1430, 2021 | 770 | 2021 |
TISCH2: expanded datasets and new tools for single-cell transcriptome analyses of the tumor microenvironment Y Han, Y Wang, X Dong, D Sun, Z Liu, J Yue, H Wang, T Li, C Wang Nucleic acids research 51 (D1), D1425-D1431, 2023 | 238 | 2023 |
Integrative analyses of single-cell transcriptome and regulome using MAESTRO C Wang, D Sun, X Huang, C Wan, Z Li, Y Han, Q Qin, J Fan, X Qiu, Y Xie, ... Genome biology 21 (1), 1-28, 2020 | 155 | 2020 |
Evaluation of cell-cell interaction methods by integrating single-cell RNA sequencing data with spatial information Z Liu, D Sun, C Wang Genome Biology 23 (1), 218, 2022 | 106 | 2022 |
STRIDE: accurately decomposing and integrating spatial transcriptomics using single-cell RNA sequencing D Sun, Z Liu, T Li, Q Wu, C Wang Nucleic Acids Research 50 (7), e42-e42, 2022 | 81 | 2022 |
Single-cell omics: experimental workflow, data analyses and applications F Sun, H Li, D Sun, S Fu, L Gu, X Shao, Q Wang, X Dong, B Duan, F Xing, ... Science China Life Sciences, 1-98, 2024 | 11 | 2024 |
Tertiary lymphoid structure and decreased CD8+ T cell infiltration in minimally invasive adenocarcinoma J Wang, D Jiang, X Zheng, W Li, T Zhao, D Wang, H Yu, D Sun, Z Li, ... Iscience 25 (3), 2022 | 8 | 2022 |
Spatial organization of the transcriptional regulatory network of Saccharomyces cerevisiae DQ Sun, L Tian, BG Ma FEBS letters 593 (8), 876-884, 2019 | 5 | 2019 |
Multi-omic profiling highlights factors associated with resistance to immuno-chemotherapy in non-small-cell lung cancer Y Yan, D Sun, J Hu, Y Chen, L Sun, H Yu, Y Xiong, Z Huang, H Xia, X Zhu, ... Nature Genetics 57 (1), 126-139, 2025 | 2 | 2025 |
Tertiary lymphoid structure and CD8 T cell exclusion in minimally invasive adenocarcinoma J Wang, D Jiang, X Hu, X Zheng, W Li, T Zhao, D Wang, H Yu, D Sun, Z Li, ... medRxiv, 2020.08. 03.20166991, 2020 | 2 | 2020 |
Accurate, Scalable and Cross-platform Cell Identification for High-resolution Spatial Transcriptomics C Wang, D Sun, L Zhang, T Han, Q Wu, P Zhang | | 2024 |