フォロー
Jessica Ewald
Jessica Ewald
Broad Institute of MIT and Harvard
確認したメール アドレス: broadinstitute.org
タイトル
引用先
引用先
NetworkAnalyst 3.0: a visual analytics platform for comprehensive gene expression profiling and meta-analysis
G Zhou, O Soufan, J Ewald, REW Hancock, N Basu, J Xia
Nucleic acids research 47 (W1), W234-W241, 2019
16052019
Using MetaboAnalyst 5.0 for LC–HRMS spectra processing, multi-omics integration and covariate adjustment of global metabolomics data
Z Pang, G Zhou, J Ewald, L Chang, O Hacariz, N Basu, J Xia
Nature protocols 17 (8), 1735-1761, 2022
10122022
MicrobiomeAnalyst 2.0: comprehensive statistical, functional and integrative analysis of microbiome data
Y Lu, G Zhou, J Ewald, Z Pang, T Shiri, J Xia
Nucleic Acids Research 51 (W1), W310-W318, 2023
2372023
OmicsNet 2.0: a web-based platform for multi-omics integration and network visual analytics
G Zhou, Z Pang, Y Lu, J Ewald, J Xia
Nucleic acids research 50 (W1), W527-W533, 2022
982022
Environmental origins of methylmercury accumulated in subarctic estuarine fish indicated by mercury stable isotopes
M Li, AT Schartup, AP Valberg, JD Ewald, DP Krabbenhoft, R Yin, ...
Environmental science & technology 50 (21), 11559-11568, 2016
782016
OmicsAnalyst: a comprehensive web-based platform for visual analytics of multi-omics data
G Zhou, J Ewald, J Xia
Nucleic Acids Research 49 (W1), W476-W482, 2021
742021
ExpressAnalyst: A unified platform for RNA-sequencing analysis in non-model species
P Liu, J Ewald, Z Pang, E Legrand, YS Jeon, J Sangiovanni, O Hacariz, ...
Nature Communications 14 (1), 2995, 2023
582023
Web-based multi-omics integration using the analyst software suite
JD Ewald, G Zhou, Y Lu, J Kolic, C Ellis, JD Johnson, PE Macdonald, ...
Nature Protocols, 1-31, 2024
572024
Selenium and stable mercury isotopes provide new insights into mercury toxicokinetics in pilot whales
M Li, CA Juang, JD Ewald, R Yin, B Mikkelsen, DP Krabbenhoft, ...
Science of the Total Environment 710, 136325, 2020
522020
Organ-specific differences in mercury speciation and accumulation across ringed seal (Phoca hispida) life stages
JD Ewald, JL Kirk, M Li, EM Sunderland
Science of the Total Environment 650, 2013-2020, 2019
362019
EcoToxModules: custom gene sets to organize and analyze toxicogenomics data from ecological species
JD Ewald, O Soufan, D Crump, M Hecker, J Xia, N Basu
Environmental Science & Technology 54 (7), 4376-4387, 2020
352020
FastBMD: an online tool for rapid benchmark dose–response analysis of transcriptomics data
J Ewald, O Soufan, J Xia, N Basu
Bioinformatics 37 (7), 1035-1036, 2021
332021
A systematic review of mercury exposures from skin-lightening products
A Bastiansz, J Ewald, V Rodríguez Saldaña, A Santa-Rios, N Basu
Environmental Health Perspectives 130 (11), 116002, 2022
272022
Assessing the toxicity of 17α-ethinylestradiol in rainbow trout using a 4-day transcriptomics benchmark dose (BMD) embryo assay
AJG Alcaraz, K Mikulasek, D Potesil, B Park, K Shekh, J Ewald, ...
Environmental Science & Technology 55 (15), 10608-10618, 2021
272021
T1000: a reduced gene set prioritized for toxicogenomic studies
O Soufan, J Ewald, C Viau, D Crump, M Hecker, N Basu, J Xia
PeerJ 7, e7975, 2019
242019
Evaluating batch correction methods for image-based cell profiling
J Arevalo, E Su, JD Ewald, R van Dijk, AE Carpenter, S Singh
Nature Communications 15 (1), 6516, 2024
232024
Proteomic predictors of individualized nutrient-specific insulin secretion in health and disease
J Kolic, WQG Sun, HH Cen, JD Ewald, JC Rogalski, S Sasaki, H Sun, ...
Cell Metabolism 36 (7), 1619-1633. e5, 2024
222024
Ultrafast functional profiling of RNA-seq data for nonmodel organisms
P Liu, J Ewald, JH Galvez, J Head, D Crump, G Bourque, N Basu, J Xia
Genome research 31 (4), 713-720, 2021
222021
Comparative analysis of transcriptomic points-of-departure (tPODs) and apical responses in embryo-larval fathead minnows exposed to fluoxetine
AJG Alcaraz, S Baraniuk, K Mikulášek, B Park, T Lane, C Burbridge, ...
Environmental Pollution 295, 118667, 2022
192022
Using ExpressAnalyst for Comprehensive Gene Expression Analysis in Model and Non‐Model Organisms
J Ewald, G Zhou, Y Lu, J Xia
Current Protocols 3 (11), e922, 2023
182023
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