Sergey Koren

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	すべて	2020 年以来
引用	61076	41698
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i10 指標	114	107

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Adam M. PhillippyDirector, Center for Genomics and Data Science Research, NHGRI, NIH確認したメールアドレス: nih.gov
Arang RhieStaff Scientist, NHGRI, NIH確認したメールアドレス: nih.gov
Brian WalenzNHGRI, NIH確認したメールアドレス: nih.gov
Todd J. TreangenAssociate Professor, Department of Computer Science, Rice University確認したメールアドレス: rice.edu
Nicholas BergmanDirector, National Biodefense Analysis and Countermeasures Center確認したメールアドレス: st.dhs.gov
Mihai PopProfessor of Computer Science, University of Maryland, College Park確認したメールアドレス: umd.edu
Timothy P. SmithUSDA/ARS U.S. Meat Animal Research Center確認したメールアドレス: ars.usda.gov
Jason Rafe MillerAssistant Professor of Computer Science, Shepherd University確認したメールアドレス: shepherd.edu
Brian OndovYale School of Medicine確認したメールアドレス: yale.edu
Derek BickhartResearch Geneticist, USDA ARS確認したメールアドレス: ars.usda.gov
Jay GhuryeGoogle確認したメールアドレス: google.com
Granger G. Sutton IIIProfessor of Informatics, J. Craig Venter Institute確認したメールアドレス: jcvi.org
Evan EichlerProfessor of Genome Sciences, University of Washington確認したメールアドレス: gs.washington.edu
Konstantin BerlinCisco確認したメールアドレス: cisco.com
Alexander T DiltheyInstitute of Medical Microbiology, University Hospital of Dusseldorf確認したメールアドレス: med.uni-duesseldorf.de
Glennis LogsdonUniversity of Pennsylvania確認したメールアドレス: pennmedicine.upenn.edu
Erich JarvisRockefeller University, Duke University, HHMI確認したメールアドレス: rockefeller.edu
John L. WilliamsUniversity of Adelaide / Università Cattolica del Sacro Cuore確認したメールアドレス: adelaide.edu.au
Michael C. SchatzBloomberg Distinguished Professor, Johns Hopkins University確認したメールアドレス: cs.jhu.edu
Karen H MigaAssistant Professor; Associate Director, UC Santa Cruz Genomics Institute, University of California確認したメールアドレス: ucsc.edu

フォロー

Sergey Koren

Associate Investigator, NHGRI/NIH

確認したメールアドレス: nih.gov - ホームページ

Bioinformatics High-performance computing Genome Assembly Computational Biology Computer Science


タイトル引用回数順公開年順タイトル順	引用先引用先	年
Structure, function and diversity of the healthy human microbiome nature 486 (7402), 207-214, 2012	10904	2012
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation S Koren, BP Walenz, K Berlin, JR Miller, NH Bergman, AM Phillippy Genome research 27 (5), 722-736, 2017	6675	2017
Mash: fast genome and metagenome distance estimation using MinHash BD Ondov, TJ Treangen, P Melsted, AB Mallonee, NH Bergman, S Koren, ... Genome biology 17, 1-14, 2016	2824	2016
A framework for human microbiome research nature 486 (7402), 215-221, 2012	2668	2012
The complete sequence of a human genome S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ... Science 376 (6588), 44-53, 2022	2574	2022
Towards complete and error-free genome assemblies of all vertebrate species A Rhie, SA McCarthy, O Fedrigo, J Damas, G Formenti, S Koren, ... Nature 592 (7856), 737-746, 2021	2107	2021
Nanopore sequencing and assembly of a human genome with ultra-long reads M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ... Nature biotechnology 36 (4), 338-345, 2018	2042	2018
Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies A Rhie, BP Walenz, S Koren, AM Phillippy Genome biology 21, 1-27, 2020	1987	2020
Assembly algorithms for next-generation sequencing data JR Miller, S Koren, G Sutton Genomics 95 (6), 315-327, 2010	1645	2010
The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes TJ Treangen, BD Ondov, S Koren, AM Phillippy Genome biology 15, 1-15, 2014	1632	2014
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome AM Wenger, P Peluso, WJ Rowell, PC Chang, RJ Hall, GT Concepcion, ... Nature biotechnology 37 (10), 1155-1162, 2019	1555	2019
Hybrid error correction and de novo assembly of single-molecule sequencing reads S Koren, MC Schatz, BP Walenz, J Martin, JT Howard, G Ganapathy, ... Nature biotechnology 30 (7), 693-700, 2012	1232	2012
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing K Berlin, S Koren, CS Chin, JP Drake, JM Landolin, AM Phillippy Nature biotechnology 33 (6), 623-630, 2015	1105	2015
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly VA Schneider, T Graves-Lindsay, K Howe, N Bouk, HC Chen, PA Kitts, ... Genome research 27 (5), 849-864, 2017	1064	2017
GAGE: A critical evaluation of genome assemblies and assembly algorithms SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ... Genome Research 22 (3), 557-567, 2012	902	2012
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... Gigascience 2 (1), 2047-217X-2-10, 2013	819	2013
Telomere-to-telomere assembly of a complete human X chromosome KH Miga, S Koren, A Rhie, MR Vollger, A Gershman, A Bzikadze, ... Nature 585 (7823), 79-84, 2020	773	2020
Integrating Hi-C links with assembly graphs for chromosome-scale assembly J Ghurye, A Rhie, BP Walenz, A Schmitt, S Selvaraj, M Pop, AM Phillippy, ... PLoS computational biology 15 (8), e1007273, 2019	768	2019
The bonobo genome compared with the chimpanzee and human genomes K Prüfer, K Munch, I Hellmann, K Akagi, JR Miller, B Walenz, S Koren, ... Nature 486 (7404), 527-531, 2012	693	2012
Aggressive assembly of pyrosequencing reads with mates JR Miller, AL Delcher, S Koren, E Venter, BP Walenz, A Brownley, ... Bioinformatics 24 (24), 2818-2824, 2008	686	2008

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