| Single-cell transcriptional profiling reveals cellular diversity and intercommunication in the mouse heart DA Skelly, GT Squiers, MA McLellan, MT Bolisetty, P Robson, ... Cell reports 22 (3), 600-610, 2018 | 528 | 2018 |
| The 100-genomes strains, an S. cerevisiae resource that illuminates its natural phenotypic and genotypic variation and emergence as an opportunistic pathogen PK Strope, DA Skelly, SG Kozmin, G Mahadevan, EA Stone, ... Genome research 25 (5), 762-774, 2015 | 408 | 2015 |
| A powerful and flexible statistical framework for testing hypotheses of allele-specific gene expression from RNA-seq data DA Skelly, M Johansson, J Madeoy, J Wakefield, JM Akey Genome research 21 (10), 1728-1737, 2011 | 298 | 2011 |
| High-resolution transcriptomic profiling of the heart during chronic stress reveals cellular drivers of cardiac fibrosis and hypertrophy MA McLellan, DA Skelly, MSI Dona, GT Squiers, GE Farrugia, TL Gaynor, ... bioRxiv 854026, 2019 | 217 | 2019 |
| Dynamic interstitial cell response during myocardial infarction predicts resilience to rupture in genetically diverse mice E Forte, DA Skelly, M Chen, S Daigle, KA Morelli, O Hon, VM Philip, ... Cell reports 30 (9), 3149-3163. e6, 2020 | 172 | 2020 |
| Integrative phenomics reveals insight into the structure of phenotypic diversity in budding yeast DA Skelly, GE Merrihew, M Riffle, CF Connelly, EO Kerr, M Johansson, ... Genome research 23 (9), 1496-1504, 2013 | 168 | 2013 |
| Proteomic and transcriptomic profiling reveal different aspects of aging in the kidney Y Takemon, JM Chick, I Gerdes Gyuricza, DA Skelly, O Devuyst, SP Gygi, ... elife 10, e62585, 2021 | 101 | 2021 |
| Inherited variation in gene expression DA Skelly, J Ronald, JM Akey Annual review of genomics and human genetics 10 (1), 313-332, 2009 | 88 | 2009 |
| Mouse Phenome Database: an integrative database and analysis suite for curated empirical phenotype data from laboratory mice MA Bogue, SC Grubb, DO Walton, VM Philip, G Kolishovski, T Stearns, ... Nucleic acids research 46 (D1), D843-D850, 2018 | 80 | 2018 |
| Natural genetic variation determines microglia heterogeneity in wild-derived mouse models of Alzheimer’s disease HS Yang, KD Onos, K Choi, KJ Keezer, DA Skelly, GW Carter, GR Howell Cell Reports 34 (6), 2021 | 73 | 2021 |
| Cross-priming dendritic cells exacerbate immunopathology after ischemic tissue damage in the heart E Forte, B Perkins, A Sintou, HS Kalkat, A Papanikolaou, C Jenkins, ... Circulation 143 (8), 821-836, 2021 | 72 | 2021 |
| Bayesian model selection reveals biological origins of zero inflation in single-cell transcriptomics K Choi, Y Chen, DA Skelly, GA Churchill Genome biology 21, 1-16, 2020 | 70 | 2020 |
| Naive pluripotent stem cells exhibit phenotypic variability that is driven by genetic variation D Ortmann, S Brown, A Czechanski, S Aydin, D Muraro, Y Huang, ... Cell stem cell 27 (3), 470-481. e6, 2020 | 48 | 2020 |
| Mapping the effects of genetic variation on chromatin state and gene expression reveals loci that control ground state pluripotency DA Skelly, A Czechanski, C Byers, S Aydin, C Spruce, C Olivier, K Choi, ... Cell Stem Cell 27 (3), 459-469. e8, 2020 | 40* | 2020 |
| Anti-integrin αv therapy improves cardiac fibrosis after myocardial infarction by blunting cardiac PW1+ stromal cells M Bouvet, O Claude, M Roux, D Skelly, N Masurkar, N Mougenot, ... Scientific Reports 10 (1), 11404, 2020 | 35 | 2020 |
| Out of Alaska: morphological diversity within the genus Eurytemora from its ancestral Alaskan range (Crustacea, Copepoda) SI Dodson, DA Skelly, CE Lee Fifty years after the ‘‘Homage to Santa Rosalia’’: Old and new paradigms on …, 2010 | 34 | 2010 |
| 2μ plasmid in Saccharomyces species and in Saccharomyces cerevisiae PK Strope, SG Kozmin, DA Skelly, PM Magwene, FS Dietrich, ... FEMS Yeast Research 15 (8), fov090, 2015 | 27 | 2015 |
| Population Genomics of Intron Splicing in 38 Saccharomyces cerevisiae Genome Sequences DA Skelly, J Ronald, CF Connelly, JM Akey Genome biology and evolution 1, 466-478, 2009 | 24 | 2009 |
| Mitochondrial Genome Variation Affects Multiple Respiration and Nonrespiration Phenotypes in Saccharomyces cerevisiae S Vijayraghavan, SG Kozmin, PK Strope, DA Skelly, Z Lin, J Kennell, ... Genetics 211 (2), 773-786, 2019 | 20 | 2019 |
| Sporadic, global linkage disequilibrium between unlinked segregating sites DA Skelly, PM Magwene, EA Stone Genetics 202 (2), 427-437, 2016 | 20 | 2016 |