| Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer YF Chan, ME Marks, FC Jones, G Villarreal Jr, MD Shapiro, SD Brady, ... science 327 (5963), 302-305, 2010 | 1168 | 2010 |
| Genetic and developmental basis of evolutionary pelvic reduction in threespine sticklebacks MD Shapiro, ME Marks, CL Peichel, BK Blackman, KS Nereng, B Jónsson, ... Nature 428 (6984), 717-723, 2004 | 1014 | 2004 |
| The genetic architecture of parallel armor plate reduction in threespine sticklebacks PF Colosimo, CL Peichel, K Nereng, BK Blackman, MD Shapiro, ... PLoS biology 2 (5), e109, 2004 | 482 | 2004 |
| Genomic diversity and evolution of the head crest in the rock pigeon MD Shapiro, Z Kronenberg, C Li, ET Domyan, H Pan, M Campbell, H Tan, ... Science 339 (6123), 1063-1067, 2013 | 314 | 2013 |
| Turnover of sex chromosomes in the stickleback fishes (Gasterosteidae) JA Ross, JR Urton, J Boland, MD Shapiro, CL Peichel PLoS genetics 5 (2), e1000391, 2009 | 270 | 2009 |
| Parallel genetic origins of pelvic reduction in vertebrates MD Shapiro, MA Bell, DM Kingsley Proceedings of the National Academy of Sciences 103 (37), 13753-13758, 2006 | 256 | 2006 |
| Dynamic patterns of retinoic acid synthesis and response in the developing mammalian heart JB Moss, J Xavier-Neto, MD Shapiro, SM Nayeem, P McCaffery, ... Developmental biology 199 (1), 55-71, 1998 | 255 | 1998 |
| Developmental basis of evolutionary digit loss in the Australian lizard Hemiergis MD Shapiro, J Hanken, N Rosenthal Journal of Experimental Zoology Part B: Molecular and Developmental …, 2003 | 167 | 2003 |
| A retinoic acid-inducible transgenic marker of sino-atrial development in the mouse heart J Xavier-Neto, CM Neville, MD Shapiro, L Houghton, GF Wang, ... Development 126 (12), 2677-2687, 1999 | 162 | 1999 |
| Modular skeletal evolution in sticklebacks is controlled by additive and clustered quantitative trait loci CT Miller, AM Glazer, BR Summers, BK Blackman, AR Norman, ... Genetics 197 (1), 405-420, 2014 | 147 | 2014 |
| Wham: Identifying Structural Variants of Biological Consequence Z Kronenberg, EJ Osborne, K Cone, E Domyan, MD Shapiro, N Elde, ... PLoS Computational Biology 11, 2015 | 146 | 2015 |
| Sequential programs of retinoic acid synthesis in the myocardial and epicardial layers of the developing avian heart J Xavier-Neto, MD Shapiro, L Houghton, N Rosenthal Developmental biology 219 (1), 129-141, 2000 | 135 | 2000 |
| Divergence, convergence, and the ancestry of feral populations in the domestic rock pigeon SA Stringham, EE Mulroy, J Xing, D Record, MW Guernsey, ... Current biology 22 (4), 302-308, 2012 | 129 | 2012 |
| The genetic architecture of skeletal convergence and sex determination in ninespine sticklebacks MD Shapiro, BR Summers, S Balabhadra, JT Aldenhoven, AL Miller, ... Current Biology 19 (13), 1140-1145, 2009 | 104 | 2009 |
| Developmental morphology of limb reduction in hemiergis (squamata: scincidae): chondrogenesis, osteogenesis, and heterochrony MD Shapiro Journal of Morphology 254 (3), 211-231, 2002 | 99 | 2002 |
| Molecular shifts in limb identity underlie development of feathered feet in two domestic avian species ET Domyan, Z Kronenberg, CR Infante, AI Vickrey, SA Stringham, ... elife 5, e12115, 2016 | 94 | 2016 |
| Domestic pigeons MD Shapiro, ET Domyan Current Biology 23 (8), R302-R303, 2013 | 89 | 2013 |
| Epistatic and combinatorial effects of pigmentary gene mutations in the domestic pigeon ET Domyan, MW Guernsey, Z Kronenberg, S Krishnan, RE Boissy, ... Current Biology 24 (4), 459-464, 2014 | 88 | 2014 |
| Introgression of regulatory alleles and a missense coding mutation drive plumage pattern diversity in the rock pigeon AI Vickrey, R Bruders, Z Kronenberg, E Mackey, RJ Bohlender, ... Elife 7, e34803, 2018 | 82 | 2018 |
| Phylogeography of ninespine sticklebacks (Pungitius pungitius) in North America: glacial refugia and the origins of adaptive traits JT Aldenhoven, MA Miller, PS Corneli, MD Shapiro Molecular ecology 19 (18), 4061-4076, 2010 | 82 | 2010 |
