FAIR principles: interpretations and implementation considerations A Jacobsen, R de Miranda Azevedo, N Juty, D Batista, S Coles, R Cornet, ... Data intelligence 2 (1-2), 10-29, 2020 | 337 | 2020 |
The Salmonella enterica Pan-genome A Jacobsen, RS Hendriksen, FM Aaresturp, DW Ussery, C Friis Microbial ecology 62, 487-504, 2011 | 240 | 2011 |
Recommendations for improving the quality of rare disease registries Y Kodra, J Weinbach, M Posada-De-La-Paz, A Coi, SL Lemonnier, ... International journal of environmental research and public health 15 (8), 1644, 2018 | 170 | 2018 |
A generic workflow for the data FAIRification process A Jacobsen, R Kaliyaperumal, LOB da Silva Santos, B Mons, E Schultes, ... Data Intelligence 2 (1-2), 56-65, 2020 | 112 | 2020 |
Aurora kinase A (AURKA) interaction with Wnt and Ras-MAPK signalling pathways in colorectal cancer A Jacobsen, LJW Bosch, SR Martens-de Kemp, B Carvalho, ... Scientific reports 8 (1), 7522, 2018 | 56 | 2018 |
The FAIR principles: First generation implementation choices and challenges B Mons, E Schultes, F Liu, A Jacobsen Data Intelligence 2 (1-2), 1-9, 2020 | 53 | 2020 |
Applying the FAIR principles to data in a hospital: challenges and opportunities in a pandemic N Queralt-Rosinach, R Kaliyaperumal, CH Bernabé, Q Long, SA Joosten, ... Journal of biomedical semantics 13 (1), 12, 2022 | 44 | 2022 |
FAIR convergence matrix: Optimizing the reuse of existing FAIR-related resources HP Sustkova, KM Hettne, P Wittenburg, A Jacobsen, T Kuhn, R Pergl, ... Data Intelligence 2 (1-2), 158-170, 2020 | 39 | 2020 |
Semantic modelling of common data elements for rare disease registries, and a prototype workflow for their deployment over registry data R Kaliyaperumal, MD Wilkinson, PA Moreno, N Benis, R Cornet, ... Journal of biomedical semantics 13 (1), 9, 2022 | 36 | 2022 |
A catalogue of 863 Rett-syndrome-causing MECP2 mutations and lessons learned from data integration F Ehrhart, A Jacobsen, M Rigau, M Bosio, R Kaliyaperumal, JFJ Laros, ... Scientific data 8 (1), 10, 2021 | 25 | 2021 |
De-novo FAIRification via an Electronic Data Capture system by automated transformation of filled electronic Case Report Forms into machine-readable data MG Kersloot, A Jacobsen, KHJ Groenen, B dos Santos Vieira, ... Journal of Biomedical Informatics 122, 103897, 2021 | 22 | 2021 |
Towards FAIRification of sensitive and fragmented rare disease patient data: challenges and solutions in European Reference Network registries B dos Santos Vieira, CH Bernabé, S Zhang, H Abaza, N Benis, A Cámara, ... Orphanet journal of rare diseases 17 (1), 436, 2022 | 21 | 2022 |
The de novo FAIRification process of a registry for vascular anomalies KHJ Groenen, A Jacobsen, MG Kersloot, B dos Santos Vieira, ... Orphanet journal of rare diseases 16, 1-10, 2021 | 21 | 2021 |
MECP2 variation in Rett syndrome—An overview of current coverage of genetic and phenotype data within existing databases GS Townend, F Ehrhart, HJ van Kranen, M Wilkinson, A Jacobsen, ... Human mutation 39 (7), 914-924, 2018 | 21 | 2018 |
Construction and experimental validation of a Petri net model of Wnt/β-catenin signaling A Jacobsen, N Heijmans, F Verkaar, MJ Smit, J Heringa, ... PLoS One 11 (5), e0155743, 2016 | 21 | 2016 |
BioASF: a framework for automatically generating executable pathway models specified in BioPAX R Haydarlou, A Jacobsen, N Bonzanni, KA Feenstra, S Abeln, J Heringa Bioinformatics 32 (12), i60-i69, 2016 | 18 | 2016 |
Highlights from the tenth ISCB Student Council Symposium 2014 F Rahman, K Wilkins, A Jacobsen, A Junge, E Vicedo, D Deblasio, ... BMC Bioinformatics 16, doi:10.1186/1471-2105-16-S2-A1, 2015 | 18 | 2015 |
Luiz Olavo Bonino da Silva Santos, Juliane Schneider, George Strawn, Mark Thompson, Andra Waagmeester, Tobias Weigel, Mark D. Wilkinson, Egon L. Willighagen, Peter Wittenburg … A Jacobsen, R de Miranda Azevedo, N Juty, D Batista, S Coles, R Cornet, ... Data Intelligence 2 (1-2), 10-29, 2020 | 13 | 2020 |
FAIR Principles: Interpretations and Implementation Considerations. Data Intelligence 2: 10‑29 A Jacobsen, R de Miranda Azevedo, N Juty, D Batista, S Coles, R Cornet, ... | 12 | 2020 |
FAIR principles: Interpretations and implementation considerations. Data Intelligence, 2 (1–2), 10–29 A Jacobsen, R de Miranda Azevedo, N Juty, D Batista, S Coles, R Cornet, ... | 11 | 2020 |