| Finishing the euchromatic sequence of the human genome International Human Genome Sequencing Consortium Nature 431 (7011), 931-945, 2004 | 5354 | 2004 |
| Community structure and metabolism through reconstruction of microbial genomes from the environment GW Tyson, J Chapman, P Hugenholtz, EE Allen, RJ Ram, PM Richardson, ... Nature 428 (6978), 37-43, 2004 | 2893 | 2004 |
| Insights into social insects from the genome of the honeybee Apis mellifera GM Weinstock, GE Robinson, RA Gibbs, KC Worley, JD Evans, ... Nature 443 (7114), 931-949, 2006 | 2070* | 2006 |
| The genome of the model beetle and pest Tribolium castaneum S Richards, RA Gibbs, GM Weinstock, SJ Brown, R Denell, RW Beeman, ... Nature 452 (7190), 949-955, 2008 | 1474 | 2008 |
| The genome sequence of taurine cattle: a window to ruminant biology and evolution. GS Bovine, CG Elsik, RL Tellam, KC Worley, RA Gibbs, DM Muzny, ... Science (New York, NY) 324 (5926), 522, 2009 | 1433 | 2009 |
| Ab initio gene finding in Drosophila genomic DNA AA Salamov, VV Solovyev Genome research 10 (4), 516-522, 2000 | 1356 | 2000 |
| A high quality draft consensus sequence of the genome of a heterozygous grapevine variety R Velasco, A Zharkikh, M Troggio, DA Cartwright, A Cestaro, D Pruss, ... PloS one 2 (12), e1326, 2007 | 1323 | 2007 |
| The genome of the sea urchin Strongylocentrotus purpuratus E Sodergren, GM Weinstock, EH Davidson, RA Cameron, RA Gibbs, ... Science 314 (5801), 941-952, 2006 | 1280 | 2006 |
| Genome sequence of the pea aphid Acyrthosiphon pisum International Aphid Genomics Consortium PLoS biology 8 (2), e1000313, 2010 | 1023 | 2010 |
| Automatic Annotation of Microbial Genomes and Metagenomic Sequences. V Solovyev, A Salamov Metagenomics and its Applications in Agriculture, Biomedicine and …, 2011 | 951* | 2011 |
| Functional and evolutionary insights from the genomes of three parasitoid Nasonia species JH Werren, S Richards, CA Desjardins, O Niehuis, J Gadau, ... Science 327 (5963), 343-348, 2010 | 941 | 2010 |
| Automatic annotation of eukaryotic genes, pseudogenes and promoters V Solovyev, P Kosarev, I Seledsov, D Vorobyev Genome Biol 7 (Suppl 1), S10, 2006 | 844 | 2006 |
| The ctenophore genome and the evolutionary origins of neural systems LL Moroz, KM Kocot, MR Citarella, S Dosung, TP Norekian, ... Nature, 2014 | 812 | 2014 |
| Assessment of transcript reconstruction methods for RNA-seq T Steijger, JF Abril, PG Engström, F Kokocinski, TJ Hubbard, R Guigó, ... Nature methods, 2013 | 780 | 2013 |
| Analysis of canonical and non-canonical splice sites in mammalian genomes M Burset, IA Seledtsov, VV Solovyev Nucleic Acids Research 28 (21), 4364-4375, 2000 | 769 | 2000 |
| Assemblathon 1: A competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011 | 633 | 2011 |
| Systematic evaluation of spliced alignment programs for RNA-seq data PG Engström, T Steijger, B Sipos, GR Grant, A Kahles, G Rätsch, ... Nature methods, 2013 | 602 | 2013 |
| Predicting internal exons by oligonucleotide composition and discriminant analysis of spliceable open reading frames VV Solovyev, AA Salamov, CB Lawrence Nucleic Acids Research 22 (24), 5156-5163, 1994 | 455 | 1994 |
| Finding the missing honey bee genes: lessons learned from a genome upgrade CG Elsik, KC Worley, AK Bennett, M Beye, F Camara, CP Childers, ... BMC Genomics 15 (1), 86, 2014 | 441 | 2014 |
| Prediction of protein secondary structure by combining nearest-neighbor algorithms and multiple sequence alignments AA Salamov, VV Solovyev Journal of molecular biology 247 (1), 11-15, 1995 | 439 | 1995 |