Single-sequence protein structure prediction using language models from deep learning R Chowdhury, N Bouatta, S Biswas, C Rochereau, GM Church, PK Sorger, ... Nature Biotechnology, 2021 | 389 | 2021 |
Artificial water channels enable fast and selective water permeation through water-wire networks W Song, H Joshi, R Chowdhury, JS Najem, Y Shen, C Lang, ... Nature nanotechnology 15 (1), 73-79, 2020 | 149 | 2020 |
Conversion of slaughterhouse and poultry farm animal fats and wastes to biodiesel: Parametric sensitivity and fuel quality assessment R Chakraborty, AK Gupta, R Chowdhury Renewable and Sustainable Energy Reviews 29, 120-134, 2014 | 138 | 2014 |
From directed evolution to computational enzyme engineering—a review R Chowdhury, CD Maranas AIChE Journal 66 (3), e16847, 2020 | 121 | 2020 |
Rapid fabrication of precise high-throughput filters from membrane protein nanosheets YM Tu, W Song, T Ren, Y Shen, R Chowdhury, P Rajapaksha, TE Culp, ... Nature Materials 19 (3), 347-354, 2020 | 91 | 2020 |
Computational prediction of the effect of amino acid changes on the binding affinity between SARS-CoV-2 spike RBD and human ACE2 C Chen, VS Boorla, D Banerjee, R Chowdhury, VS Cavener, RH Nissly, ... Proceedings of the National Academy of Sciences 118 (42), e2106480118, 2021 | 84 | 2021 |
Highly Active C8-Acyl-ACP Thioesterase Variant Isolated by a Synthetic Selection Strategy NJ Hernández Lozada, RY Lai, TR Simmons, KA Thomas, R Chowdhury, ... ACS Synthetic Biology 7 (9), 2205-2215, 2018 | 82 | 2018 |
Foldamer-based ultrapermeable and highly selective artificial water channels that exclude protons A Roy, J Shen, H Joshi, W Song, YM Tu, R Chowdhury, R Ye, N Li, C Ren, ... Nature Nanotechnology 16 (8), 911-917, 2021 | 79 | 2021 |
PoreDesigner for tuning solute selectivity in a robust and highly permeable outer membrane pore R Chowdhury, T Ren, M Shankla, K Decker, M Grisewood, J Prabhakar, ... Nature communications 9 (1), 3661, 2018 | 66 | 2018 |
Computational biophysical characterization of the SARS-CoV-2 spike protein binding with the ACE2 receptor and implications for infectivity R Chowdhury, VS Boorla, CD Maranas Computational and structural biotechnology journal 18, 2573-2582, 2020 | 59* | 2020 |
Facile affinity maturation of antibody variable domains using natural diversity mutagenesis KE Tiller, R Chowdhury, T Li, SD Ludwig, S Sen, CD Maranas, PM Tessier Frontiers in immunology 8, 986, 2017 | 59 | 2017 |
OptMAVEn-2.0: de novo design of variable antibody regions against targeted antigen epitopes R Chowdhury, MF Allan, CD Maranas Antibodies 7 (3), 23, 2018 | 57 | 2018 |
Using gene essentiality and synthetic lethality information to correct yeast and CHO cell genome-scale models R Chowdhury, A Chowdhury, CD Maranas Metabolites 5 (4), 536-570, 2015 | 49 | 2015 |
Recombination and lineage-specific mutations linked to the emergence of SARS-CoV-2 JÁ Patiño-Galindo, I Filip, R Chowdhury, CD Maranas, PK Sorger, ... Genome Medicine 124 (13), 2021 | 48 | 2021 |
7 log virus removal in a simple functionalized sand filter L Samineni, B Xiong, R Chowdhury, A Pei, L Kuehster, H Wang, R Dickey, ... Environmental Science & Technology 53 (21), 12706-12714, 2019 | 25 | 2019 |
Directed Evolution Reveals the Functional Sequence Space of an Adenylation Domain Specificity Code K Throckmorton, V Vinnik, R Chowdhury, T Cook, MG Chevrette, ... ACS chemical biology, 2019 | 25 | 2019 |
Application of ANFIS model to optimise the photocatalytic degradation of chlorhexidine digluconate S Sarkar, R Chowdhury, R Das, S Chakraborty, H Choi, C Bhattacharjee RSC Advances 4 (40), 21141-21150, 2014 | 17 | 2014 |
A new type of artificial water channels A Noy, MAC Wanunu Paper Highlight ►Nature nanotechnology 15 (1), 9-10, 2020 | 15 | 2020 |
IPRO+/−: Computational Protein Design Tool Allowing for Insertions and Deletions R Chowdhury, MJ Grisewood, VS Boorla, Q Yan, BF Pfleger Structure 28 (8), Doi Link: 10.1016/j.str.2020.08.003, 2020 | 14 | 2020 |
Effective pathogen removal in sustainable natural fiber Moringa filters L Samineni, S De Respino, YM Tu, R Chowdhury, RP Mohanty, H Oh, ... npj Clean Water 5 (1), 27, 2022 | 11 | 2022 |