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Lydia Y Liu
Lydia Y Liu
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Molecular landmarks of tumor hypoxia across cancer types
V Bhandari, C Hoey, LY Liu, E Lalonde, J Ray, J Livingstone, R Lesurf, ...
Nature genetics 51 (2), 308-318, 2019
6062019
A clinically applicable integrative molecular classification of meningiomas
F Nassiri, J Liu, V Patil, Y Mamatjan, JZ Wang, R Hugh-White, AM Macklin, ...
Nature 597 (7874), 119-125, 2021
3262021
The evolutionary landscape of localized prostate cancers drives clinical aggression
SMG Espiritu, LY Liu, Y Rubanova, V Bhandari, EM Holgersen, LM Szyca, ...
Cell 173 (4), 1003-1013. e15, 2018
2542018
A pan-cancer compendium of chromosomal instability
RM Drews, B Hernando, M Tarabichi, K Haase, T Lesluyes, PS Smith, ...
Nature 606 (7916), 976-983, 2022
2142022
Precision radiotherapy: reduction in radiation for oropharyngeal cancer in the 30 ROC trial
N Riaz, E Sherman, X Pei, H Schöder, M Grkovski, R Paudyal, N Katabi, ...
JNCI: Journal of the National Cancer Institute 113 (6), 742-751, 2021
1462021
A community effort to create standards for evaluating tumor subclonal reconstruction
A Salcedo, M Tarabichi, SMG Espiritu, AG Deshwar, M David, NM Wilson, ...
Nature biotechnology 38 (1), 97-107, 2020
772020
Proteomic discovery of non-invasive biomarkers of localized prostate cancer using mass spectrometry
A Khoo, LY Liu, JO Nyalwidhe, OJ Semmes, D Vesprini, MR Downes, ...
Nature Reviews Urology 18 (12), 707-724, 2021
482021
Quantifying the influence of mutation detection on tumour subclonal reconstruction
LY Liu, V Bhandari, A Salcedo, SMG Espiritu, QD Morris, T Kislinger, ...
Nature Communications 11 (1), 1-15, 2020
24*2020
Prostate cancer multiparametric magnetic resonance imaging visibility is a tumor-intrinsic phenomena
A Khoo, LY Liu, TY Sadun, A Salmasi, A Pooli, E Felker, KE Houlahan, ...
Journal of hematology & oncology 15 (1), 48, 2022
142022
Glycoproteomics Identifies Plexin-B3 as a Targetable Cell Surface Protein Required for the Growth and Invasion of Triple-Negative Breast Cancer Cells
L Kuhlmann, M Govindarajan, S Mejia-Guerrero, V Ignatchenko, LY Liu, ...
Journal of Proteome Research 21 (9), 2224-2236, 2022
102022
Prostate cancer reshapes the secreted and extracellular vesicle urinary proteomes
A Khoo, M Govindarajan, Z Qiu, LY Liu, V Ignatchenko, M Waas, ...
Nature Communications 15 (1), 5069, 2024
62024
Neoadjuvant Exercise Therapy in Prostate Cancer: A Phase 1, Decentralized Nonrandomized ControlledTrial
LW Jones, CS Moskowitz, CP Lee, GA Fickera, SS Chun, MG Michalski, ...
JAMA oncology 10 (9), 1187-1194, 2024
52024
Metapipeline-DNA: A Comprehensive Germline & Somatic Genomics Nextflow Pipeline
Y Patel, C Zhu, TN Yamaguchi, NK Wang, N Wiltsie, AE Gonzalez, ...
bioRxiv, 2024
22024
A digital, decentralized trial of exercise therapy in patients with cancer
WP Underwood, MG Michalski, CP Lee, GA Fickera, SS Chun, SE Eng, ...
npj Digital Medicine 7 (1), 304, 2024
12024
Orphan noncoding RNAs: novel regulators and cancer biomarkers
M Teng, LY Liu, JT Hua, S Chen, HH He
Annals of translational medicine 7 (Suppl 1), 2019
12019
The Germline and Somatic Origins of Prostate Cancer Heterogeneity
TN Yamaguchi, KE Houlahan, H Zhu, N Kurganovs, J Livingstone, NS Fox, ...
Cancer Discovery, 2025
2025
moPepGen: Rapid and Comprehensive Identification of Non-canonical Peptides
C Zhu, LY Liu, A Ha, TN Yamaguchi, H Zhu, R Hugh-White, J Livingstone, ...
bioRxiv, 2024
2024
Divergent Evolution in Bilateral Prostate Cancer: a Case Study
R Haas, Y Patel, LY Liu, RR Huang, A Weiner, TN Yamaguchi, R Agrawal, ...
medRxiv, 2024.08. 22.24312320, 2024
2024
Quantifying the seed sensitivity of cancer subclonal reconstruction algorithms
PL Steinberg, LY Liu, A Neiman-Golden, Y Patel, PC Boutros
bioRxiv, 2024.02. 05.579021, 2024
2024
Exercise and tumor genomic landscapes in 2,879 patients with cancer
BL Tsai, LY Liu, SE Eng, WP Underwood, CP Lee, JW Bliss, PC Boutros, ...
Cancer Research 83 (7_Supplement), 3121-3121, 2023
2023
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