| giotto-tda: A Topological Data Analysis Toolkit for Machine Learning and Data Exploration G Tauzin, U Lupo, L Tunstall, JB Pérez, M Caorsi, AM Medina-Mardones, ... J. Mach. Learn. Res. 22, 39:1-39:6, 2021 | 196 | 2021 |
| On the structure and topography of free-standing chemically modified graphene NR Wilson, PA Pandey, R Beanland, JP Rourke, U Lupo, G Rowlands, ... New Journal of Physics 12 (12), 125010, 2010 | 63 | 2010 |
| Protein language models trained on multiple sequence alignments learn phylogenetic relationships U Lupo, D Sgarbossa, AF Bitbol Nature Communications 13 (1), 6298, 2022 | 38 | 2022 |
| Generative power of a protein language model trained on multiple sequence alignments D Sgarbossa, U Lupo, AF Bitbol Elife 12, e79854, 2023 | 37 | 2023 |
| giotto-ph: A Python Library for High-Performance Computation of Persistent Homology of Vietoris-Rips Filtrations JB Pérez, S Hauke, U Lupo, M Caorsi, A Dassatti arXiv preprint arXiv:2107.05412, 2021 | 24 | 2021 |
| ICLR 2021 Challenge for Computational Geometry & Topology: Design and Results N Miolane, M Caorsi, U Lupo, M Guerard, N Guigui, J Mathe, Y Cabanes, ... arXiv preprint arXiv:2108.09810, 2021 | 16 | 2021 |
| Non-existence of isometry-invariant Hadamard states for a Kruskal black hole in a box and for massless fields on 1+ 1 Minkowski spacetime with a uniformly accelerating mirror BS Kay, U Lupo Classical and Quantum Gravity 33 (21), 215001, 2016 | 14 | 2016 |
| Persistence Steenrod modules U Lupo, AM Medina-Mardones, G Tauzin Journal of Applied and Computational Topology 6 (4), 475-502, 2022 | 11 | 2022 |
| Aspects of (quantum) field theory on curved spacetimes, particularly in the presence of boundaries U Lupo University of York, 2015 | 8 | 2015 |
| Pairing interacting protein sequences using masked language modeling U Lupo, D Sgarbossa, AF Bitbol Proceedings of the National Academy of Sciences 121 (27), e2311887121, 2024 | 7 | 2024 |
| ICLR 2022 Challenge for Computational Geometry & Topology: Design and Results A Myers, S Utpala, S Talbar, S Sanborn, C Shewmake, C Donnat, J Mathe, ... Topological, Algebraic and Geometric Learning Workshops 2022, 269-276, 2022 | 4 | 2022 |
| On the global "two-sided" characteristic Cauchy problem for linear wave equations on manifolds U Lupo Letters in Mathematical Physics, 2018 | 4 | 2018 |
| Pairing interacting protein sequences using masked language modeling D Sgarbossa, U Lupo, AF Bitbol ICLR 2024 Workshop on Machine Learning for Genomics Explorations, 2024 | 2 | 2024 |
| Impact of phylogeny on structural contact inference from protein sequence data N Dietler, U Lupo, AF Bitbol Journal of the Royal Society Interface 20 (199), 20220707, 2023 | 2 | 2023 |
| DiffPaSS—High-performance differentiable pairing of protein sequences using soft scores U Lupo, D Sgarbossa, M Milighetti, AF Bitbol Bioinformatics 41 (1), btae738, 2025 | | 2025 |
| Topology in Real-World Machine Learning and Data Analysis K Hess, F Chazal, U Lupo Frontiers Media SA, 2022 | | 2022 |
| Predicting interaction partners using masked language modeling U Lupo, D Sgarbossa, AF Bitbol | | 2022 |
| MSA Pairing Transfomer: protein interaction partner prediction with few-shot contrastive learning A Hawkins-Hooker, DB Cerigo, U Lupo, D Jones, B Paige ICML 2024 Workshop on Efficient and Accessible Foundation Models for …, 0 | | |
Anne-Florence BitbolAssistant Professor, Institute of Bioengineering, School of Life Sciences, EPFLepfl.ch의 이메일 확인됨