| DotMotif: an open-source tool for connectome subgraph isomorphism search and graph queries JK Matelsky, EP Reilly, EC Johnson, J Stiso, DS Bassett, BA Wester, ... Scientific Reports 11 (1), 13045, 2021 | 30 | 2021 |
| Functional block identification in circuit design recovery J Couch, E Reilly, M Schuyler, B Barrett 2016 IEEE International Symposium on Hardware Oriented Security and Trust …, 2016 | 16 | 2016 |
| Neural reconstruction integrity: A metric for assessing the connectivity accuracy of reconstructed neural networks EP Reilly, JS Garretson, WR Gray Roncal, DM Kleissas, BA Wester, ... Frontiers in neuroinformatics 12, 74, 2018 | 12 | 2018 |
| Random threshold graphs EP Reilly, ER Scheinerman the electronic journal of combinatorics, R130-R130, 2009 | 11 | 2009 |
| Finding structures in large-scale graphs. SPIE Defense, Security, and Sensing SP Chin, E Reilly, L Lu International Society for Optics and Photonics, 2012 | 10 | 2012 |
| Toward a reproducible, scalable framework for processing large neuroimaging datasets EC Johnson, M Wilt, LM Rodriguez, R Norman-Tenazas, C Rivera, ... BioRxiv, 615161, 2019 | 8 | 2019 |
| A mathematical analysis of network controllability through driver nodes SP Chin, J Cohen, A Albin, M Hayvanovych, E Reilly, G Brown, J Harer IEEE Transactions on Computational Social Systems 4 (2), 40-51, 2017 | 8 | 2017 |
| Random threshold digraphs E Reilly, E Scheinerman, Y Zhang The Electronic Journal of Combinatorics, P2. 48-P2. 48, 2014 | 6 | 2014 |
| Machine learning for activity-based road transportation emissions estimation D Rollend, K Foster, TM Kott, R Mocharla, R Muñoz, N Fendley, ... Environmental Data Science 2, e38, 2023 | 5 | 2023 |
| Detecting anomalous swarming agents with graph signal processing K Schultz, A Saksena, EP Reilly, R Hingorani, M Villafañe-Delgado 2021 IEEE International Conference on Autonomous Systems (ICAS), 1-5, 2021 | 4 | 2021 |
| Circuit motifs and graph properties of connectome development in C. elegans JK Matelsky, R Norman-Tenazas, F Davenport, EP Reilly, W Gray-Roncal bioRxiv, 2021.07. 11.451911, 2021 | 4 | 2021 |
| Graph Signal Processing for Infrastructure Resilience: Suitability and Future Directions K Schultz, M Villafane-Delgado, EP Reilly, GM Hwang, A Saksena 2020 Resilience Week (RWS), 64-70, 2020 | 4 | 2020 |
| System Integration with Multiscale Networks (SIMoN): A Modular Framework For Resource Management Models M Hughes, M Kelbaugh, V Campbell, E Reilly, S Agarwala, M Wilt, ... 2020 Winter Simulation Conference (WSC), 656-667, 2020 | 3 | 2020 |
| Connecting neural reconstruction integrity (NRI) to graph metrics and biological priors EP Reilly, EC Johnson, MJ Hughes, D Ramsden, L Park, B Wester, ... Complex Networks XI: Proceedings of the 11th Conference on Complex Networks …, 2020 | 2 | 2020 |
| Random threshold graphs and related topics EP Reilly The Johns Hopkins University, 2010 | 2 | 2010 |
| Exploiting large neuroimaging datasets to create connectome-constrained approaches for more robust, efficient, and adaptable artificial intelligence EC Johnson, BS Robinson, GK Vallabha, J Joyce, JK Matelsky, ... Artificial Intelligence and Machine Learning for Multi-Domain Operations …, 2023 | 1 | 2023 |
| Data-driven motif discovery in biological neural networks JK Matelsky, MR Robinette, B Wester, WR Gray-Roncal, EC Johnson, ... bioRxiv, 2023.10. 16.562590, 2023 | 1 | 2023 |
| Analyzing emergence in biological neural networks using graph signal processing K Schultz, M Villafañe-Delgado, EP Reilly, A Saksena, GM Hwang Emergent Behavior in System of Systems Engineering, 171-192, 2022 | 1 | 2022 |
| Analyzing Collective Motion Using Graph Fourier Analysis K Schultz, M Villafane-Delgado, EP Reilly, GM Hwang, A Saksena arXiv preprint arXiv:2103.08583, 2021 | 1 | 2021 |
| Connectome subgraph isomorphisms and graph queries with DotMotif JK Matelsky, EP Reilly, EC Johnson, BA Wester, W Gray-Roncal bioRxiv, 2020 | 1 | 2020 |