Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases J Lloyd-Price, C Arze, AN Ananthakrishnan, M Schirmer, J Avila-Pacheco, ... Nature 569 (7758), 655-662, 2019 | 2367 | 2019 |
Multivariable association discovery in population-scale meta-omics studies H Mallick, A Rahnavard, LJ McIver, S Ma, Y Zhang, LH Nguyen, TL Tickle, ... PLOS Computational Biology 17 (11), e1009442, 2021 | 1496 | 2021 |
Species-level functional profiling of metagenomes and metatranscriptomes EA Franzosa, LJ McIver, G Rahnavard, LR Thompson, M Schirmer, ... Nature methods 15 (11), 962-968, 2018 | 1474 | 2018 |
Strains, functions and dynamics in the expanded Human Microbiome Project J Lloyd-Price, A Mahurkar, G Rahnavard, J Crabtree, J Orvis, AB Hall, ... Nature 550 (7674), 61, 2017 | 1289 | 2017 |
American gut: an open platform for citizen science microbiome research D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ... Msystems 3 (3), 10.1128/msystems. 00031-18, 2018 | 783 | 2018 |
The National COVID Cohort Collaborative (N3C): rationale, design, infrastructure, and deployment MA Haendel, CG Chute, TD Bennett, DA Eichmann, J Guinney, WA Kibbe, ... Journal of the American Medical Informatics Association 28 (3), 427-443, 2021 | 499 | 2021 |
Obese individuals with and without type 2 diabetes show different gut microbial functional capacity and composition LB Thingholm, MC Rühlemann, M Koch, B Fuqua, G Laucke, R Boehm, ... Cell host & microbe 26 (2), 252-264. e10, 2019 | 415 | 2019 |
Host genetic variation and its microbiome interactions within the Human Microbiome Project R Kolde, EA Franzosa, G Rahnavard, AB Hall, H Vlamakis, C Stevens, ... Genome medicine 10, 1-13, 2018 | 179 | 2018 |
High-sensitivity pattern discovery in large, paired multiomic datasets AR Ghazi, K Sucipto, A Rahnavard, EA Franzosa, LJ McIver, J Lloyd-Price, ... Bioinformatics 38 (Supplement_1), i378-i385, 2022 | 66* | 2022 |
Discovery of bioactive microbial gene products in inflammatory bowel disease Y Zhang, A Bhosle, S Bae, LJ McIver, G Pishchany, EK Accorsi, ... Nature 606 (7915), 754-760, 2022 | 66 | 2022 |
Association of early aspirin use with in-hospital mortality in patients with moderate COVID-19 JH Chow, A Rahnavard, M Gomberg-Maitland, R Chatterjee, P Patodi, ... JAMA network open 5 (3), e223890-e223890, 2022 | 56 | 2022 |
Predictors of 30-day unplanned readmission after carotid artery stenting using artificial intelligence A Amritphale, R Chatterjee, S Chatterjee, N Amritphale, A Rahnavard, ... Advances in therapy 38, 2954-2972, 2021 | 37 | 2021 |
Erratum: Strains, functions and dynamics in the expanded Human Microbiome Project. J Lloyd-Price, A Mahurkar, G Rahnavard, J Crabtree, J Orvis, AB Hall, ... Nature 551 (7679), 256, 2017 | 35 | 2017 |
Impact of fecal microbiota transplantation on gut bacterial bile acid metabolism in humans JM Bustamante, T Dawson, C Loeffler, Z Marfori, JR Marchesi, BH Mullish, ... Nutrients 14 (24), 5200, 2022 | 31 | 2022 |
American gut: An open platform for citizen science microbiome research. mSystems, 3 (3) D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ... DOI: https://doi. org/10.1128/mSystems, 00031-18, 2018 | 29* | 2018 |
Expression of human endogenous retroviruses in systemic lupus erythematosus: multiomic integration with gene expression N Stearrett, T Dawson, A Rahnavard, P Bachali, ML Bendall, C Zeng, ... Frontiers in immunology 12, 661437, 2021 | 28 | 2021 |
Metabolite, protein, and tissue dysfunction associated with COVID-19 disease severity A Rahnavard, B Mann, A Giri, R Chatterjee, KA Crandall Scientific reports 12 (1), 1-16, 2022 | 27 | 2022 |
Differential expression of single‐cell RNA‐seq data using Tweedie models H Mallick, S Chatterjee, S Chowdhury, S Chatterjee, A Rahnavard, ... Statistics in Medicine, 2022 | 27 | 2022 |
Metabolomic epidemiology offers insights into disease aetiology H Fuller, Y Zhu, J Nicholas, HA Chatelaine, EM Drzymalla, AK Sarvestani, ... Nature metabolism 5 (10), 1656-1672, 2023 | 16 | 2023 |
A method to evaluate web services anomaly detection using hidden markov models G Rahnavard, MSA Najjar, S Taherifar 2010 International Conference on Computer Applications and Industrial …, 2010 | 16 | 2010 |