| CNN-MGP: convolutional neural networks for metagenomics gene prediction A Al-Ajlan, A El Allali Interdisciplinary Sciences: Computational Life Sciences 11 (4), 628-635, 2019 | 93 | 2019 |
| Machine learning in nutrient management: A review O Ennaji, L Vergütz, A El Allali Artificial Intelligence in Agriculture 9, 1-11, 2023 | 44 | 2023 |
| Machine learning applications in RNA modification sites prediction A El Allali, Z Elhamraoui, R Daoud Computational and Structural Biotechnology Journal 19, 5510-5524, 2021 | 35 | 2021 |
| Genome-wide association analysis of chickpea germplasms differing for salinity tolerance based on DArTseq markers SM Ahmed, AM Alsamman, A Jighly, MH Mubarak, K Al-Shamaa, ... Plos one 16 (12), e0260709, 2021 | 31 | 2021 |
| Genome-wide analysis identified candidate variants and genes associated with heat stress adaptation in Egyptian sheep breeds AM Aboul Naga, AM Alsamman, A El Allali, MH Elshafie, ES Abdelal, ... Frontiers in Genetics, 2671, 2022 | 26 | 2022 |
| Feature selection for gene prediction in metagenomic fragments A Al-Ajlan, A El Allali BioData mining 11, 1-12, 2018 | 26 | 2018 |
| MGC: a metagenomic gene caller A El Allali, JR Rose BMC bioinformatics 14, 1-10, 2013 | 25 | 2013 |
| In silico protein engineering shows that novel mutations affecting NAD+ binding sites may improve phosphite dehydrogenase stability and activity S Baammi, R Daoud, A El Allali Scientific Reports 13 (1), 1878, 2023 | 24 | 2023 |
| Biomolecular databases and subnetwork identification approaches of interest to big data community: an expert review O Al-Harazi, A El Allali, D Colak Omics: a journal of integrative biology 23 (3), 138-151, 2019 | 20 | 2019 |
| Monte Carlo method and GA-MLR-based QSAR modeling of NS5A inhibitors against the hepatitis C virus W Liman, M Oubahmane, I Hdoufane, I Bjij, D Villemin, R Daoud, ... Molecules 27 (9), 2729, 2022 | 18 | 2022 |
| A network-based methodology to identify subnetwork markers for diagnosis and prognosis of colorectal cancer O Al-Harazi, IH Kaya, A El Allali, D Colak Frontiers in genetics 12, 721949, 2021 | 16 | 2021 |
| Evolving strategies and application of proteins and peptide therapeutics in cancer treatment AG Mukherjee, UR Wanjari, AV Gopalakrishnan, P Bradu, A Biswas, ... Biomedicine & Pharmacotherapy 163, 114832, 2023 | 15 | 2023 |
| Host Cell Proteases Mediating SARS-CoV-2 Entry: An Overview M Oubahmane, I Hdoufane, I Bjij, NA Lahcen, D Villemin, R Daoud, ... Current topics in medicinal chemistry, 2022 | 15 | 2022 |
| PltRNAdb: Plant transfer RNA database MM Mokhtar, A El Allali PLoS One 17 (5), e0268904, 2022 | 15 | 2022 |
| In silico design of novel CDK2 inhibitors through QSAR, ADMET, molecular docking and molecular dynamics simulation studies M Moussaoui, M Baassi, S Baammi, H Soufi, M Salah, R Daoud, ... Journal of Biomolecular Structure and Dynamics 41 (23), 13646-13662, 2023 | 14 | 2023 |
| Unleashing Nature's Potential: A Computational Approach to Discovering Novel VEGFR-2 Inhibitors from African natural compound using Virtual Screening, ADMET Analysis, Molecular … S Baammi, A El Allali, R Daoud Frontiers in Molecular Biosciences 10, 1227643, 2023 | 13 | 2023 |
| Design of potent inhibitors targeting the main protease of SARS-CoV-2 using QSAR modeling, molecular docking, and molecular dynamics simulations M Oubahmane, I Hdoufane, C Delaite, A Sayede, D Cherqaoui, A El Allali Pharmaceuticals 16 (4), 608, 2023 | 13 | 2023 |
| A Large-scale assessment of the quality of plant genome assemblies using the LTR assembly index MM Mokhtar, HM Abd-Elhalim, A El Allali AoB PLANTS, plad015, 2023 | 13 | 2023 |
| MZPAQ: a FASTQ data compression tool A El Allali, M Arshad Source code for biology and medicine 14, 1-13, 2019 | 13 | 2019 |
| Assessing the effect of a series of mutations on the dynamic behavior of phosphite dehydrogenase using molecular docking, molecular dynamics and quantum mechanics/molecular … S Baammi, R Daoud, A El Allali Journal of Biomolecular Structure and Dynamics 41 (9), 4154-4166, 2023 | 12 | 2023 |