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Wendell Jones
Wendell Jones
Bioinformaticist, Expression Analysis, EA Genomics, and Q2 Solutions
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The MicroArray Quality Control (MAQC) project shows inter-and intraplatform reproducibility of gene expression measurements
Nature biotechnology 24 (9), 1151-1161, 2006
24522006
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
L Shi, G Campbell, WD Jones, F Campagne, Z Wen, SJ Walker, Z Su, ...
Nature biotechnology 28 (8), 827-838, 2010
9002010
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
Nature biotechnology 32 (9), 903-914, 2014
8892014
A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
Y Yu, JC Fuscoe, C Zhao, C Guo, M Jia, T Qing, DI Bannon, L Lancashire, ...
Nature communications 5 (1), 3230, 2014
3722014
DNMT3b overexpression contributes to a hypermethylator phenotype in human breast cancer cell lines
JD Roll, AG Rivenbark, WD Jones, WB Coleman
Molecular cancer 7, 1-14, 2008
3142008
Reporting guidelines for human microbiome research: the STORMS checklist
C Mirzayi, A Renson, Genomic Standards Consortium, ...
Nature medicine 27 (11), 1885-1892, 2021
2832021
The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies
L Shi, WD Jones, RV Jensen, SC Harris, RG Perkins, FM Goodsaid, ...
BMC bioinformatics 9, 1-19, 2008
2702008
Tumor mutational burden is a determinant of immune-mediated survival in breast cancer
A Thomas, ED Routh, A Pullikuth, G Jin, J Su, JW Chou, KA Hoadley, ...
Oncoimmunology 7 (10), e1490854, 2018
2202018
Using RNA sample titrations to assess microarray platform performance and normalization techniques
R Shippy, S Fulmer-Smentek, RV Jensen, WD Jones, PK Wolber, ...
Nature biotechnology 24 (9), 1123-1131, 2006
2162006
Evaluating the analytical validity of circulating tumor DNA sequencing assays for precision oncology
IW Deveson, B Gong, K Lai, JS LoCoco, TA Richmond, J Schageman, ...
Nature biotechnology 39 (9), 1115-1128, 2021
1912021
Method and system for dynamic risk assessment of software systems
WD Jones, SJ Aud, JP Hudepohl, ML Flournory, WB Snipes, EC Schutz
US Patent 6,219,805, 2001
1622001
Classification tree models of software quality over multiple releases
TM Khoshgoftaar, EB Allen, WD Jones, JI Hudepohl
Proceedings 10th International Symposium on Software Reliability Engineering …, 1999
1601999
k-Nearest neighbor models for microarray gene expression analysis and clinical outcome prediction
RM Parry, W Jones, TH Stokes, JH Phan, RA Moffitt, H Fang, L Shi, ...
The pharmacogenomics journal 10 (4), 292-309, 2010
1382010
Whole-genome gene expression profiling of formalin-fixed, paraffin-embedded tissue samples
C April, B Klotzle, T Royce, E Wickham-Garcia, T Boyaniwsky, J Izzo, ...
PloS one 4 (12), e8162, 2009
1322009
Toward best practice in cancer mutation detection with whole-genome and whole-exome sequencing
W Xiao, L Ren, Z Chen, LT Fang, Y Zhao, J Lack, M Guan, B Zhu, ...
Nature biotechnology 39 (9), 1141-1150, 2021
1182021
Microarray-based gene expression profiling for molecular classification of breast cancer and identification of new targets for therapy
R Sandhu, JS Parker, WD Jones, CA Livasy, WB Coleman
Laboratory Medicine 41 (6), 364-372, 2010
982010
Dysregulation of the epigenome in triple-negative breast cancers: basal-like and claudin-low breast cancers express aberrant DNA hypermethylation
JD Roll, AG Rivenbark, R Sandhu, JS Parker, WD Jones, LA Carey, ...
Experimental and Molecular Pathology 95 (3), 276-287, 2013
812013
Data mining for predictors of software quality
TM Khoshgoftaar, EB Allen, WD Jones, JP Hudepohl
International Journal of Software Engineering and Knowledge Engineering 9 …, 1999
781999
Technical reproducibility of genotyping SNP arrays used in genome-wide association studies
H Hong, L Xu, J Liu, WD Jones, Z Su, B Ning, R Perkins, W Ge, K Miclaus, ...
Public Library of Science 7 (9), e44483, 2012
762012
DNA methylation-dependent epigenetic regulation of gene expression in MCF-7 breast cancer cells
AG Rivenbark, WD Jones, JD Risher, WB Coleman
Epigenetics 1 (1), 33-45, 2006
612006
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학술자료 1–20