| An effective dispersant for oil spills based on food-grade amphiphiles JC Athas, K Jun, C McCafferty, O Owoseni, VT John, SR Raghavan Langmuir 30 (31), 9285-9294, 2014 | 147 | 2014 |
| The protein organization of a red blood cell W Sae-Lee, CL McCafferty, EJ Verbeke, PC Havugimana, O Papoulas, ... Cell Reports 40 (3), 2022 | 46 | 2022 |
| Native doublet microtubules from Tetrahymena thermophila reveal the importance of outer junction proteins S Kubo, CS Black, E Joachimiak, SK Yang, T Legal, K Peri, AAZ Khalifa, ... Nature communications 14 (1), 2168, 2023 | 45 | 2023 |
| Integrating cellular electron microscopy with multimodal data to explore biology across space and time CL McCafferty, S Klumpe, RE Amaro, W Kukulski, L Collinson, BD Engel Cell 187 (3), 563-584, 2024 | 37 | 2024 |
| In silico Mapping of Protein Unfolding Mutations for Inherited Disease CL McCafferty, YV Sergeev Scientific Reports 6 (1), 37298, 2016 | 36 | 2016 |
| Integrative modeling reveals the molecular architecture of the intraflagellar transport A (IFT-A) complex CL McCafferty, O Papoulas, MA Jordan, G Hoogerbrugge, C Nichols, ... Elife 11, e81977, 2022 | 33 | 2022 |
| Does AlphaFold2 model proteins’ intracellular conformations? An experimental test using cross-linking mass spectrometry of endogenous ciliary proteins CL McCafferty, EL Pennington, O Papoulas, DW Taylor, EM Marcotte Communications biology 6 (1), 421, 2023 | 29 | 2023 |
| Integrated modeling of the Nexin-dynein regulatory complex reveals its regulatory mechanism A Ghanaeian, S Majhi, CL McCafferty, B Nami, CS Black, SK Yang, ... Nature Communications 14 (1), 5741, 2023 | 21 | 2023 |
| Structural biology in the multi-omics era CL McCafferty, EJ Verbeke, EM Marcotte, DW Taylor Journal of Chemical Information and Modeling 60 (5), 2424-2429, 2020 | 15 | 2020 |
| Dataset of eye disease-related proteins analyzed using the unfolding mutation screen CL McCafferty, YV Sergeev Scientific Data 3 (1), 1-10, 2016 | 15 | 2016 |
| Global computational mutagenesis provides a critical stability framework in protein structures CL McCafferty, YV Sergeev PLoS One 12 (12), e0189064, 2017 | 13 | 2017 |
| Simplified geometric representations of protein structures identify complementary interaction interfaces CL McCafferty, EM Marcotte, DW Taylor Proteins: Structure, Function, and Bioinformatics 89 (3), 348-360, 2021 | 9 | 2021 |
| & Taylor, DW (2024). RNA targeting and cleavage by the type III-Dv CRISPR effector complex EA Schwartz, JP Bravo, M Ahsan, LA Macias, CL McCafferty, ... Nature Communications 15 (1), 3324, 0 | 8 | |
| RNA targeting and cleavage by the type III-Dv CRISPR effector complex EA Schwartz, JPK Bravo, M Ahsan, LA Macias, CL McCafferty, ... Nature communications 15 (1), 3324, 2024 | 6 | 2024 |
| An amino acid-resolution interactome for motile cilia illuminates the structure and function of ciliopathy protein complexes CL McCafferty, O Papoulas, C Lee, KH Bui, DW Taylor, EM Marcotte, ... bioRxiv, 2023 | 5 | 2023 |
| Correction: Global computational mutagenesis provides a critical stability framework in protein structures CL McCafferty, YV Sergeev Plos one 13 (1), e0191881, 2018 | 4 | 2018 |
| Assembly of multi-subunit fusion proteins into the RNA-targeting type III-D CRISPR-Cas effector complex EA Schwartz, JPK Bravo, LA Macias, CL McCafferty, TL Dangerfield, ... bioRxiv, 2022.06. 13.496011, 2022 | 3 | 2022 |
| Type III CRISPR-Cas effectors act as protein-assisted ribozymes during RNA cleavage D Taylor, E Schwartz, J Bravo, M Ahsan, L Macias, C McCafferty, ... | 2 | 2023 |
| Towards community-driven visual proteomics with large-scale cryo-electron tomography of Chlamydomonas reinhardtii R Kelley, S Khavnekar, RD Righetto, J Heebner, M Obr, X Zhang, ... bioRxiv, 2024.12. 28.630444, 2024 | 1 | 2024 |
| Improving integrative 3D modeling into low‐to medium‐resolution electron microscopy structures with evolutionary couplings CL McCafferty, DW Taylor, EM Marcotte Protein Science 30 (5), 1006-1021, 2021 | 1 | 2021 |