| The emergence of SARS-CoV-2 variants of concern is driven by acceleration of the substitution rate JH Tay, AF Porter, W Wirth, S Duchene Molecular Biology and Evolution 39 (2), msac013, 2022 | 102 | 2022 |
| Genomics-informed responses in the elimination of COVID-19 in Victoria, Australia: an observational, genomic epidemiological study CR Lane, NL Sherry, AF Porter, S Duchene, K Horan, P Andersson, ... The Lancet Public Health 6 (8), e547-e556, 2021 | 72* | 2021 |
| Metagenomic identification of viral sequences in laboratory reagents AF Porter, J Cobbin, CX Li, JS Eden, EC Holmes Viruses 13 (11), 2122, 2021 | 34 | 2021 |
| The origins and genomic diversity of American Civil War Era smallpox vaccine strains AT Duggan, J Klunk, AF Porter, AN Dhody, R Hicks, GL Smith, ... Genome biology 21, 1-11, 2020 | 29 | 2020 |
| Novel hepaci-and pegi-like viruses in native Australian wildlife and non-human primates AF Porter, JHO Pettersson, WS Chang, E Harvey, K Rose, M Shi, JS Eden, ... Virus Evolution 6 (2), veaa064, 2020 | 28* | 2020 |
| Evolutionary rate of SARS-CoV-2 increases during zoonotic infection of farmed mink AF Porter, DFJ Purcell, BP Howden, S Duchene Virus Evolution 9 (1), vead002, 2023 | 20 | 2023 |
| Diversity and evolution of novel invertebrate DNA viruses revealed by meta-transcriptomics AF Porter, M Shi, JS Eden, YZ Zhang, EC Holmes Viruses 11 (12), 1092, 2019 | 17 | 2019 |
| Comment: characterization of two historic smallpox specimens from a Czech museum AF Porter, AT Duggan, HN Poinar, EC Holmes Viruses 9 (10), 276, 2017 | 17 | 2017 |
| New rules for genomics-informed COVID-19 responses–Lessons learned from the first waves of the Omicron variant in Australia AF Porter, N Sherry, P Andersson, SA Johnson, S Duchene, BP Howden PLoS Genetics 18 (10), e1010415, 2022 | 14 | 2022 |
| The importance of utilizing travel history metadata for informative phylogeographical inferences: a case study of early SARS-CoV-2 introductions into Australia AF Porter, L Featherstone, CR Lane, NL Sherry, ML Nolan, D Lister, ... Microbial Genomics 9 (8), 001099, 2023 | 3 | 2023 |
| Lymphocytic Choriomeningitis Virus Infection, Australia L Caly, AF Porter, J Chua, JP Collet, JD Druce, MG Catton, S Duchene Emerging Infectious Diseases 28 (8), 1713, 2022 | 2 | 2022 |
| Parameters for one health genomic surveillance of Escherichia coli from Australia AE Watt, ML Cummins, CM Donato, W Wirth, AF Porter, P Andersson, ... Nature Communications 16 (1), 17, 2025 | 1 | 2025 |
| Phylodynamics of high pathogenicity avian influenza virus in Bangladesh identifying domestic ducks as the amplifying host reservoir A Islam, M Wille, MZ Rahman, AF Porter, ME Hosaain, MM Hassan, ... Emerging microbes & infections 13 (1), 2399268, 2024 | | 2024 |
| Genomic characterisation reveals a dominant lineage of SARS-CoV-2 in Papua New Guinea T Palou, M Wilmot, S Duchene, A Porter, J Kemoi, D Suarkia, ... Virus Evolution 8 (1), veac033, 2022 | | 2022 |
| Next generation sequencing to explore microbial diversity, origins and evolution AF Porter | | 2021 |