| The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes J Jacobs, M Atkins, K Davie, H Imrichova, L Romanelli, V Christiaens, ... Nature genetics 50 (7), 1011-1020, 2018 | 152 | 2018 |
| Decoding gene regulation in the fly brain J Janssens*, S Aibar*, II Taskiran*, JN Ismail, AE Gomez, G Aughey, ... Nature 601 (7894), 630-636, 2022 | 140 | 2022 |
| Cell-type-directed design of synthetic enhancers II Taskiran, KI Spanier, H Dickmänken, N Kempynck, A Pančíková, ... Nature 626 (7997), 212-220, 2024 | 104 | 2024 |
| Cross-species analysis of enhancer logic using deep learning L Minnoye*, II Taskiran*, D Mauduit, M Fazio, L Van Aerschot, ... Genome research 30 (12), 1815-1834, 2020 | 96 | 2020 |
| Identification of genomic enhancers through spatial integration of single‐cell transcriptomics and epigenomics C Bravo González‐Blas, XJ Quan, R Duran‐Romaña, II Taskiran, ... Molecular systems biology 16 (5), e9438, 2020 | 68 | 2020 |
| Interpretation of allele-specific chromatin accessibility using cell state-aware deep learning ZK Atak*, II Taskiran*, J Demeulemeester, C Flerin, D Mauduit, L Minnoye, ... Genome Research, gr. 260851.120, 2021 | 52 | 2021 |
| Single-cell spatial multi-omics and deep learning dissect enhancer-driven gene regulatory networks in liver zonation C Bravo Gonzalez-Blas, I Matetovici, H Hillen, II Taskiran, R Vandepoel, ... Nature Cell Biology 26 (1), 153-167, 2024 | 24* | 2024 |
| Biallelic missense variants in ZBTB11 can cause intellectual disability in humans Z Fattahi, TI Sheikh, L Musante, M Rasheed, II Taskiran, R Harripaul, ... Human molecular genetics 27 (18), 3177-3188, 2018 | 24 | 2018 |
| Analysis of long and short enhancers in melanoma cell states D Mauduit, II Taskiran, L Minnoye, M de Waegeneer, V Christiaens, ... eLife 10, e71735, 2021 | 17 | 2021 |
| CNKSR1 gene defect can cause syndromic autosomal recessive intellectual disability S Kazeminasab, II Taskiran, Z Fattahi, N Bazazzadegan, M Hosseini, ... American Journal of Medical Genetics Part B: Neuropsychiatric Genetics, 2018 | 15 | 2018 |
| Exploring the code of life: From decoding to designing cell-type-specific enhancers with deep learning II Taskiran, S Aerts | | 2023 |