| MONI: a pangenomic index for finding maximal exact matches M Rossi, M Oliva, B Langmead, T Gagie, C Boucher Journal of Computational Biology 29 (2), 169-187, 2022 | 78* | 2022 |
| SPUMONI 2: improved classification using a pangenome index of minimizer digests OY Ahmed, M Rossi, T Gagie, C Boucher, B Langmead Genome Biology 24 (1), 122, 2023 | 27* | 2023 |
| Pan-genomic matching statistics for targeted nanopore sequencing O Ahmed, M Rossi, S Kovaka, MC Schatz, T Gagie, C Boucher, ... Iscience 24 (6), 2021 | 27 | 2021 |
| Computing the original eBWT faster, simpler, and with less memory C Boucher, D Cenzato, Z Lipták, M Rossi, M Sciortino International Symposium on String Processing and Information Retrieval 12944 …, 2021 | 26 | 2021 |
| PFP Compressed Suffix Trees∗ C Boucher, O Cvacho, T Gagie, J Holub, G Manzini, G Navarro, M Rossi 2021 Proceedings of the Workshop on Algorithm Engineering and Experiments …, 2021 | 25 | 2021 |
| Comprehensive genome analysis and variant detection at scale using DRAGEN S Behera, S Catreux, M Rossi, S Truong, Z Huang, M Ruehle, A Visvanath, ... Nature Biotechnology, 1-15, 2024 | 23* | 2024 |
| PHONI: Streamed matching statistics with multi-genome references C Boucher, T Gagie, I Tomohiro, D Köppl, B Langmead, G Manzini, ... 2021 Data Compression Conference (DCC), 193-202, 2021 | 21 | 2021 |
| RLBWT tricks NK Brown, T Gagie, M Rossi LIPIcs: Leibniz international proceedings in informatics 233, 16, 2022 | 14 | 2022 |
| r-indexing the eBWT C Boucher, D Cenzato, Z Lipták, M Rossi, M Sciortino International Symposium on String Processing and Information Retrieval, 3-12, 2021 | 14 | 2021 |
| Finding maximal exact matches using the r-index M Rossi, M Oliva, P Bonizzoni, B Langmead, T Gagie, C Boucher Journal of Computational Biology 29 (2), 188-194, 2022 | 12 | 2022 |
| Tailoring r-index for Document Listing Towards Metagenomics Applications D Cobas, V Mäkinen, M Rossi International Symposium on String Processing and Information Retrieval, 291-306, 2020 | 11 | 2020 |
| Greedy additive approximation algorithms for minimum-entropy coupling problem M Rossi 2019 IEEE International Symposium on Information Theory (ISIT), 1127-1131, 2019 | 10 | 2019 |
| Bubble-flip—a new generation algorithm for prefix normal words F Cicalese, Z Lipták, M Rossi Theoretical Computer Science 743, 38-52, 2018 | 10 | 2018 |
| LZ77 via prefix-free parsing A Hong, M Rossi, C Boucher 2023 Proceedings of the Symposium on Algorithm Engineering and Experiments …, 2023 | 9 | 2023 |
| On infinite prefix normal words F Cicalese, Z Lipták, M Rossi SOFSEM 2019: Theory and Practice of Computer Science: 45th International …, 2019 | 9 | 2019 |
| Identification of allele-specific KIV-2 repeats and impact on Lp (a) measurements for cardiovascular disease risk S Behera, JR Belyeu, X Chen, LF Paulin, NQH Nguyen, E Newman, ... BMC medical genomics 17 (1), 255, 2024 | 8 | 2024 |
| Computing maximal unique matches with the r-index S Giuliani, G Romana, M Rossi arXiv preprint arXiv:2205.01576, 2022 | 7 | 2022 |
| Efficiently Merging r-indexes M Oliva, M Rossi, J Sirén, G Manzini, T Kahveci, T Gagie, C Boucher 2021 Data Compression Conference (DCC), 203-212, 2021 | 6 | 2021 |
| On Lempel-Ziv decompression in small space SJ Puglisi, M Rossi 2019 Data Compression Conference (DCC), 221-230, 2019 | 6 | 2019 |
| Efficient taxa identification using a pangenome index O Ahmed, M Rossi, C Boucher, B Langmead Genome Research 33 (7), 1069-1077, 2023 | 5 | 2023 |
Christina BoucherUniversity of Floridaufl.edu의 이메일 확인됨