| Doublet identification in single-cell sequencing data using scDblFinder PL Germain, A Lun, CG Meixide, W Macnair, MD Robinson f1000research 10, 979, 2022 | 558 | 2022 |
| Cell-type-specific cis-eQTLs in eight human brain cell types identify novel risk genes for psychiatric and neurological disorders J Bryois, D Calini, W Macnair, L Foo, E Urich, W Ortmann, VA Iglesias, ... Nature neuroscience 25 (8), 1104-1112, 2022 | 171 | 2022 |
| TGF-β induces oncofetal fibronectin that, in turn, modulates TGF-β superfamily signaling in endothelial cells E Ventura, M Weller, W Macnair, K Eschbach, C Beisel, C Cordazzo, ... Journal of cell science 131 (1), jcs209619, 2018 | 48 | 2018 |
| Mapping human adult hippocampal neurogenesis with single-cell transcriptomics: reconciling controversy or fueling the debate? G Tosoni, D Ayyildiz, J Bryois, W Macnair, CP Fitzsimons, PJ Lucassen, ... Neuron 111 (11), 1714-1731. e3, 2023 | 44 | 2023 |
| psupertime: supervised pseudotime analysis for time-series single-cell RNA-seq data W Macnair, R Gupta, M Claassen Bioinformatics 38 (Supplement_1), i290-i298, 2022 | 44* | 2022 |
| Single nuclei RNAseq stratifies multiple sclerosis patients into distinct white matter glial responses W Macnair, D Calini, E Agirre, J Bryois, S Jäkel, P Kukanja, N Stokar, V Ott, ... BioRxiv, 2022.04. 06.487263, 2022 | 24 | 2022 |
| SampleQC: robust multivariate, multi-cell type, multi-sample quality control for single-cell data W Macnair, M Robinson Genome Biology 24 (1), 23, 2023 | 16 | 2023 |
| Dynamic distribution decomposition for single-cell snapshot time series identifies subpopulations and trajectories during iPSC reprogramming JP Taylor-King, AN Riseth, W Macnair, M Claassen PLoS computational biology 16 (1), e1007491, 2020 | 12 | 2020 |
| Doublet identification in single-cell sequencing data using scDblFinder. F1000Research 10, 979 PL Germain, A Lun, W Macnair, MD Robinson DOI: https://doi. org/10.12688/f1000research 73600, 2021 | 9 | 2021 |
| Negative allosteric modulators of metabotropic glutamate receptor 3 target the stem-like phenotype of glioblastoma HG Wirsching, M Silginer, E Ventura, W Macnair, I Burghardt, M Claassen, ... Molecular Therapy-Oncolytics 20, 166-174, 2021 | 8 | 2021 |
| Tree‐ensemble analysis assesses presence of multifurcations in single cell data W Macnair, L De Vargas Roditi, S Ganscha, M Claassen Molecular systems biology 15 (3), e8552, 2019 | 4 | 2019 |
| Fenebrutinib, a Bruton’s tyrosine kinase inhibitor, blocks distinct human microglial signaling pathways J Langlois, S Lange, M Ebeling, W Macnair, R Schmucki, C Li, J DeGeer, ... Journal of Neuroinflammation 21 (1), 276, 2024 | 1 | 2024 |
| Foamy microglia link oxylipins to disease progression in multiple sclerosis D van der Vliet, X Di, TM Shamorkina, A Pavlovic, IACM Van der Vliet, ... bioRxiv, 2024.10. 18.619040, 2024 | 1 | 2024 |
| Unique transcriptional profiles of adult human immature neurons in healthy aging, Alzheimer's disease, and cognitive resilience G Tosoni, D Ayyildiz, A Penning, S Snoeck, E Santiago-Mujika, ... bioRxiv, 2025.01. 08.631686, 2025 | | 2025 |
| snRNA-seq stratifies multiple sclerosis patients into distinct white matter glial responses W Macnair, D Calini, E Agirre, J Bryois, S Jäkel, RS Smith, P Kukanja, ... Neuron, 2024 | | 2024 |
| Leveraging polygenic enrichments for risk gene prioritisation from GWAS summary statistics T Dupuis, W Macnair, A Brown, M Ebeling, J Bryois EUROPEAN JOURNAL OF HUMAN GENETICS 32, 661-661, 2024 | | 2024 |
| Cellular and molecular mapping of human adult hippocampal neurogenesis in Alzheimer’s disease G Tosoni, A Penning, D Ayyildiz, S Snoeck, SK Poovathingal, K Davie, ... Alzheimer's & Dementia 19, e074691, 2023 | | 2023 |
| Fenebrutinib, a noncovalent, reversible, Bruton's tyrosine kinase inhibitor, potently blocks neuroinflammation induced by Fcy receptor activation in human microglial systems … J Langlois, S Lange, J DeGeer, W Macnair, M Ebeling, R Schmucki, ... MULTIPLE SCLEROSIS JOURNAL 29, 593-594, 2023 | | 2023 |
| Branch point testing and supervised pseudotime inference for single cell data W Macnair ETH Zurich, 2019 | | 2019 |
| Current Challenges in Cell-Type Discovery Through Single-Cell Data L De Vargas Roditi, W Macnair, M Claassen ITM Web of Conferences 5, 00010, 2015 | | 2015 |
