| Amber 2021 DA Case, HM Aktulga, K Belfon, I Ben-Shalom, SR Brozell, DS Cerutti, ... University of California, San Francisco, 2021 | 5929 | 2021 |
| AmberTools DA Case, HM Aktulga, K Belfon, DS Cerutti, GA Cisneros, VWD Cruzeiro, ... Journal of Chemical Information and Modeling 63 (20), 6183-6191, 2023 | 597 | 2023 |
| Engineering a nicotinamide mononucleotide redox cofactor system for biocatalysis WB Black, L Zhang, WS Mak, S Maxel, Y Cui, E King, B Fong, ... Nature chemical biology 16 (1), 87-94, 2020 | 102 | 2020 |
| Recent developments in free energy calculations for drug discovery E King, E Aitchison, H Li, R Luo Frontiers in Molecular Biosciences 8, 712085, 2021 | 88 | 2021 |
| AMBER 22 reference manual DA Case, RE Duke, RC Walker, NR Skrynnikov, TE Cheatham III, ... University of California, San Francisco, United States-California, 2022 | 55 | 2022 |
| Metabolic engineering of Escherichia coli for optimized biosynthesis of nicotinamide mononucleotide, a noncanonical redox cofactor WB Black, D Aspacio, D Bever, E King, L Zhang, H Li Microbial cell factories 19, 1-10, 2020 | 50 | 2020 |
| Development of a High-Throughput, In Vivo Selection Platform for NADPH-Dependent Reactions Based on Redox Balance Principles L Zhang, E King, R Luo, H Li ACS synthetic biology 7 (7), 1715-1721, 2018 | 39 | 2018 |
| Engineering natural and noncanonical nicotinamide cofactor-dependent enzymes: design principles and technology development E King, S Maxel, H Li Current Opinion in Biotechnology 66, 217-226, 2020 | 35 | 2020 |
| A growth-based, high-throughput selection platform enables remodeling of 4-hydroxybenzoate hydroxylase active site S Maxel, D Aspacio, E King, L Zhang, AP Acosta, H Li ACS Catalysis 10 (12), 6969-6974, 2020 | 35 | 2020 |
| Directed evolution of phosphite dehydrogenase to cycle noncanonical redox cofactors via universal growth selection platform L Zhang, E King, WB Black, CM Heckmann, A Wolder, Y Cui, F Nicklen, ... Nature communications 13 (1), 5021, 2022 | 26 | 2022 |
| Leveraging Oxidative Stress to Regulate Redox Balance-Based, In Vivo Growth Selections for Oxygenase Engineering S Maxel, E King, Y Zhang, R Luo, H Li ACS Synthetic Biology 9 (11), 3124-3133, 2020 | 17 | 2020 |
| Growth-Based, High-Throughput Selection for NADH Preference in an Oxygen-Dependent Biocatalyst S Maxel, S Saleh, E King, D Aspacio, L Zhang, R Luo, H Li ACS Synthetic Biology 10 (9), 2359-2370, 2021 | 15 | 2021 |
| Estimating the Roles of Protonation and Electronic Polarization in Absolute Binding Affinity Simulations E King, R Qi, H Li, R Luo, E Aitchison Journal of Chemical Theory and Computation 17 (4), 2541-2555, 2021 | 15 | 2021 |
| Engineering Embden–Meyerhof–Parnas Glycolysis to Generate Noncanonical Reducing Power E King, Y Cui, D Aspacio, F Nicklen, L Zhang, S Maxel, R Luo, JB Siegel, ... ACS Catalysis 12 (14), 8582-8592, 2022 | 14 | 2022 |
| Orthogonal glycolytic pathway enables directed evolution of noncanonical cofactor oxidase E King, S Maxel, Y Zhang, KC Kenney, Y Cui, E Luu, JB Siegel, GA Weiss, ... Nature communications 13 (1), 7282, 2022 | 13 | 2022 |
| In Vivo, High-Throughput Selection of Thermostable Cyclohexanone Monooxygenase (CHMO) S Maxel, L Zhang, E King, AP Acosta, R Luo, H Li Catalysts 10 (8), 935, 2020 | 10 | 2020 |
| Shifting redox reaction equilibria on demand using an orthogonal redox cofactor D Aspacio, Y Zhang, Y Cui, E Luu, E King, WB Black, S Perea, Q Zhu, ... Nature Chemical Biology, 1-12, 2024 | 6 | 2024 |
| Engineering a Coenzyme A Detour To Expand the Product Scope and Enhance the Selectivity of the Ehrlich Pathway WB Black, E King, Y Wang, A Jenic, AT Rowley, K Seki, R Luo, H Li ACS synthetic biology 7 (12), 2758-2764, 2018 | 5 | 2018 |
| Pairing two growth-based, high-throughput selections to fine tune conformational dynamics in oxygenase engineering S Maxel, L Zhang, E King, D Aspacio, AP Acosta, R Luo, H Li bioRxiv, 2020.05. 22.111575, 2020 | 1 | 2020 |
| Engineering Escherichia coli Pyruvate Metabolism to Generate Noncanonical Reducing Power D Aspacio, E Luu, S Worakaensai, Y Cui, S Maxel, E King, R Hagerty, ... ACS Catalysis 14, 9776-9784, 2024 | | 2024 |
