Fast model-based estimation of ancestry in unrelated individuals DH Alexander, J Novembre, K Lange Genome Research 19 (9), 1655-1664, 2009 | 8617 | 2009 |
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data CS Chin, DH Alexander, P Marks, AA Klammer, J Drake, C Heiner, ... Nature methods 10 (6), 563-569, 2013 | 4505 | 2013 |
Enhancements to the ADMIXTURE algorithm for individual ancestry estimation DH Alexander, K Lange BMC bioinformatics 12, 1-6, 2011 | 1416 | 2011 |
A universal SNP and small-indel variant caller using deep neural networks R Poplin, PC Chang, D Alexander, S Schwartz, T Colthurst, A Ku, ... Nature biotechnology 36 (10), 983-987, 2018 | 1354 | 2018 |
A quasi-Newton acceleration for high-dimensional optimization algorithms H Zhou, D Alexander, K Lange Statistics and computing 21 (2), 261-273, 2011 | 199 | 2011 |
Stability selection for genome‐wide association DH Alexander, K Lange Genetic epidemiology 35 (7), 722-728, 2011 | 79 | 2011 |
A deep learning approach to pattern recognition for short DNA sequences A Busia, GE Dahl, C Fannjiang, DH Alexander, E Dorfman, R Poplin, ... BioRxiv, 353474, 2018 | 66 | 2018 |
Admixture 1.3 software manual DH Alexander, SS Shringarpure, J Novembre, K Lange Los Angeles: UCLA Human Genetics Software Distribution, 2015 | 59 | 2015 |
Hierarchical genome assembly method using single long insert library C Chen-Shan, P Marks, D Alexander, A Klammer, SW Turner US Patent 10,777,301, 2020 | 57 | 2020 |
Efficient analysis of large datasets and sex bias with ADMIXTURE SS Shringarpure, CD Bustamante, K Lange, DH Alexander BMC bioinformatics 17, 1-6, 2016 | 52 | 2016 |
Penalized regression for genome-wide association screening of sequence data H Zhou, DH Alexander, ME Sehl, JS Sinsheimer, EM Sobel, K Lange Biocomputing 2011, 106-117, 2011 | 43 | 2011 |
Admixture 1.22 software manual DH Alexander, J Novembre, K Lange Admixture 1.22 Software Manual, 2012 | 14 | 2012 |
Design and Characterization of Nozzle-Injection Assemblies Integrated with High-Frequency Microactuators JT Solomon, K Caines, CR Nayak, M Jones, D Alexander AIAA Journal 56 (9), 3436-3448, 2018 | 8 | 2018 |
An improved circular consensus algorithm with an application to detect HIV-1 drug-resistance associated mutations (DRAMs) NL Hepler, N Delaney, M Brown, ML Smith, D Katzenstein, EE Paxinos, ... Conference on Advances in Genome Biology and Technology, 2016 | 6 | 2016 |
Unsupervised discovery of ancestry-informative markers and genetic admixture proportions in biobank-scale datasets S Ko, BB Chu, D Peterson, C Okenwa, JC Papp, DH Alexander, EM Sobel, ... The American Journal of Human Genetics 110 (2), 314-325, 2023 | 4 | 2023 |
Detection and identification of base modifications with single molecule real-time sequencing data P Marks, O Banerjee, D Alexander | 3 | 2012 |
Seyoon Ko, Benjamin B. Chu, Daniel Peterson, 4 Chidera Okenwa, 5 Jeanette C. Papp, 6 DH Alexander, EM Sobel, H Zhou, KL Lange | | 2022 |
Studies on Resonance Enhanced Micro-actuator Nozzle Assemblies for High Speed Flow Mixing D Alexander Tuskegee University, 2018 | | 2018 |
PACIFIC SYMPOSIUM ON BIOCOMPUTING 2011, PSB 2011 C Wu, AS Walsh, R Rosenfeld, H Zhou, JS Sinsheimer, EM Sobel, ... | | 2011 |
Statistical and Computational Methods for Ancestry Estimation and Variable Selection in Genomic-Scale Datasets DH Alexander University of California, Los Angeles, 2011 | | 2011 |