SimBu: bias-aware simulation of bulk RNA-seq data with variable cell-type composition A Dietrich, G Sturm, L Merotto, F Marini, F Finotello, M List Bioinformatics 38 (Supplement_2), ii141-ii147, 2022 | 19 | 2022 |
Namco: a microbiome explorer A Dietrich, MS Matchado, M Zwiebel, B Ölke, M Lauber, I Lagkouvardos, ... Microbial Genomics 8 (8), 000852, 2022 | 19 | 2022 |
Alternative splicing analysis benchmark with DICAST A Fenn, O Tsoy, T Faro, FLM Rößler, A Dietrich, J Kersting, Z Louadi, ... NAR genomics and bioinformatics 5 (2), lqad044, 2023 | 13 | 2023 |
Diurnal rhythmicity of infant fecal microbiota and metabolites: A randomized controlled interventional trial with infant formula N Heppner, S Reitmeier, M Heddes, MV Merino, L Schwartz, A Dietrich, ... Cell Host & Microbe 32 (4), 573-587. e5, 2024 | 7 | 2024 |
Benchmarking second-generation methods for cell-type deconvolution of transcriptomic data A Dietrich, L Merotto, K Pelz, B Eder, C Zackl, K Reinisch, F Edenhofer, ... bioRxiv, 2024.06. 10.598226, 2024 | 3 | 2024 |
Making mouse transcriptomics deconvolution accessible with immunedeconv L Merotto, G Sturm, A Dietrich, M List, F Finotello Bioinformatics Advances 4 (1), vbae032, 2024 | 3 | 2024 |
Diurnal rhythmicity of fecal microbiota and metabolite profiles in the first year of life: a randomized controlled interventional trial with infant formula N Heppner, S Reitmeier, M Heddes, MV Merino, L Schwartz, A Dietrich, ... bioRxiv, 2023.10. 19.563092, 2023 | 2 | 2023 |
Next-generation deconvolution of the tumor microenvironment with omnideconv L Merotto, A Dietrich, M List, F Finotello Academic Press, 2025 | | 2025 |
Blood transcriptomics analysis offers insights into variant-specific immune response to SARS-CoV-2 M Hoffmann, LL Willruth, A Dietrich, HK Lee, L Knabl, N Trummer, ... Scientific Reports 14 (1), 2808, 2024 | | 2024 |
Insights into SARS-CoV-2 Immune Responses, Disease Severity, and Optimal Sequencing Depth M Hoffmann, LL Willruth, A Dietrich, HK Lee, L Knabl, N Trummer, ... Genetoberfest 2023, 2023 | | 2023 |
Supplemental Materials: Blood transcriptomics analysis offers insights into variant-specific immune response to SARS-CoV-2 M Hoffmann, LL Willruth, A Dietrich, HK Lee, L Knabl, N Trummer, ... | | |