| Genetic tool development in marine protists: emerging model organisms for experimental cell biology D Faktorová, RER Nisbet, JA Fernández Robledo, E Casacuberta, ... Nature Methods 17 (5), 481-494, 2020 | 146 | 2020 |
| Transfection of Capsaspora owczarzaki, a close unicellular relative of animals H Parra-Acero, N Ros-Rocher, A Perez-Posada, A Kożyczkowska, ... Development 145 (10), dev162107, 2018 | 48 | 2018 |
| Stepwise emergence of the neuronal gene expression program in early animal evolution SR Najle, X Grau-Bové, A Elek, C Navarrete, D Cianferoni, C Chiva, ... Cell 186 (21), 4676-4693. e29, 2023 | 45 | 2023 |
| Genomics and transcriptomics yields a system-level view of the biology of the pathogen Naegleria fowleri EK Herman, A Greninger, M van der Giezen, ML Ginger, ... BMC biology 19, 1-18, 2021 | 34 | 2021 |
| Novel diversity of deeply branching Holomycota and unicellular holozoans revealed by metabarcoding in Middle Paraná River, Argentina AS Arroyo, D López-Escardó, E Kim, I Ruiz-Trillo, SR Najle Frontiers in Ecology and Evolution 6, 99, 2018 | 34 | 2018 |
| Reticulate evolution in eukaryotes: origin and evolution of the nitrate assimilation pathway E Ocaña-Pallarès, SR Najle, C Scazzocchio, I Ruiz-Trillo PLoS genetics 15 (2), e1007986, 2019 | 26 | 2019 |
| Systematic benchmarking of single-cell ATAC-sequencing protocols FV De Rop, G Hulselmans, C Flerin, P Soler-Vila, A Rafels, V Christiaens, ... Nature biotechnology 42 (6), 916-926, 2024 | 25 | 2024 |
| A novel sterol desaturase-like protein promoting dealkylation of phytosterols in Tetrahymena thermophila ML Tomazic, SR Najle, AD Nusblat, AD Uttaro, CB Nudel Eukaryotic Cell 10 (3), 423-434, 2011 | 25 | 2011 |
| The Sterol-C7 Desaturase from the Ciliate Tetrahymena thermophila Is a Rieske Oxygenase, Which Is Highly Conserved in Animals SR Najle, AD Nusblat, CB Nudel, AD Uttaro Molecular biology and evolution 30 (7), 1630-1643, 2013 | 24 | 2013 |
| Oligomerization of Bacillus subtilis DesR is required for fine tuning regulation of membrane fluidity SR Najle, ME Inda, D de Mendoza, LE Cybulski Biochimica et Biophysica Acta (BBA)-General Subjects 1790 (10), 1238-1243, 2009 | 23 | 2009 |
| Stable transfection in protist Corallochytrium limacisporum identifies novel cellular features among unicellular animals relatives A Kożyczkowska, SR Najle, E Ocaña-Pallarès, C Aresté, V Shabardina, ... Current Biology 31 (18), 4104-4110. e5, 2021 | 22 | 2021 |
| A comparative ‘omics approach to candidate pathogenicity factor discovery in the brain-eating amoeba Naegleria fowleri EK Herman, A Greninger, M van der Giezen, ML Ginger, ... bioRxiv, 2020.01. 16.908186, 2020 | 14 | 2020 |
| Sterol metabolism in the filasterean Capsaspora owczarzaki has features that resemble both fungi and animals SR Najle, MC Molina, I Ruiz-Trillo, AD Uttaro Open Biology 6 (7), 160029, 2016 | 13 | 2016 |
| C-5(6) Sterol Desaturase from Tetrahymena thermophila: Gene Identification and Knockout, Sequence Analysis, and Comparison to Other C-5(6) Sterol Desaturases AD Nusblat, SR Najle, ML Tomazic, AD Uttaro, CB Nudel Eukaryotic Cell 8 (8), 1287-1297, 2009 | 13 | 2009 |
| Rel/NF-κB transcription factors emerged at the onset of opisthokonts MM Leger, N Ros-Rocher, SR Najle, I Ruiz-Trillo Genome Biology and Evolution 14 (1), evab289, 2022 | 9 | 2022 |
| The protistan origins of animal cell differentiation SR Najle, I Ruiz-Trillo Origin and Evolution of Metazoan Cell Types, 13-26, 2021 | 6 | 2021 |
| Genome‐wide Transcriptional Analysis of Tetrahymena thermophila Response to Exogenous Cholesterol SR Najle, J Hernández, E Ocaña‐Pallarès, N Garcia Siburu, AD Nusblat, ... Journal of Eukaryotic Microbiology 67 (2), 209-222, 2020 | 4 | 2020 |
| Stable transfection in the protist Corallochytrium limacisporum allows identification of novel cellular features among unicellular relatives of animals A Kożyczkowska, SR Najle, E Ocaña-Pallarès, C Aresté, I Ruiz-Trillo, ... bioRxiv, 2020.11. 12.379420, 2020 | 2 | 2020 |
| Emerging of unconventional model organism-Corallochytrium limacisporum-to study origin of animal multicellularity A Kożyczkowska, SR Najle, E Ocaña-Pallarès, C Aresté, I Ruiz-Trillo, ... | | 2021 |
| Stable transfection of unicellular relative of animals, Corallochytrium limacisporum, using Lonza Nucleofector A Kozyczkowska, S Najle, E Ocaña-Pallarès, C Aresté, I Ruiz-Trillo, ... | | 2020 |
Iñaki Ruiz-TrilloICREA research professor at Institut de Biologia Evolutiva (CSIC-UPF)Patvirtintas el. paštas ibe.upf-csic.es