| Creation and analysis of biochemical constraint-based models using the COBRA Toolbox v. 3.0 L Heirendt, S Arreckx, T Pfau, SN Mendoza, A Richelle, A Heinken, ... Nature protocols 14 (3), 639-702, 2019 | 1200 | 2019 |
| Generation of genome-scale metabolic reconstructions for 773 members of the human gut microbiota S Magnúsdóttir, A Heinken, L Kutt, DA Ravcheev, E Bauer, A Noronha, ... Nature biotechnology 35 (1), 81-89, 2017 | 794 | 2017 |
| Recon3D enables a three-dimensional view of gene variation in human metabolism E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ... Nature biotechnology 36 (3), 272-281, 2018 | 723 | 2018 |
| The Virtual Metabolic Human database: integrating human and gut microbiome metabolism with nutrition and disease A Noronha, J Modamio, Y Jarosz, E Guerard, N Sompairac, G Preciat, ... Nucleic acids research 47 (D1), D614-D624, 2019 | 360 | 2019 |
| Leigh map: A novel computational diagnostic resource for mitochondrial disease J Rahman, A Noronha, I Thiele, S Rahman Annals of neurology 81 (1), 9, 2017 | 104 | 2017 |
| ReconMap: an interactive visualization of human metabolism A Noronha, AD Daníelsdóttir, P Gawron, F Jóhannsson, S Jónsdóttir, ... Bioinformatics 33 (4), 605-607, 2017 | 79 | 2017 |
| Do genome‐scale models need exact solvers or clearer standards? A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ... Molecular systems biology 11 (10), 831, 2015 | 66 | 2015 |
| Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D GA Preciat Gonzalez, LRP El Assal, A Noronha, I Thiele, HS Haraldsdóttir, ... Journal of cheminformatics 9, 1-15, 2017 | 37 | 2017 |
| When metabolism meets physiology: Harvey and Harvetta I Thiele, S Sahoo, A Heinken, L Heirendt, MK Aurich, A Noronha, ... BioRxiv, 255885, 2018 | 24 | 2018 |
| COBREXA. jl: constraint-based reconstruction and exascale analysis M Kratochvíl, L Heirendt, SE Wilken, T Pusa, S Arreckx, A Noronha, ... Bioinformatics 38 (4), 1171-1172, 2022 | 11 | 2022 |
| An integrated network visualization framework towards metabolic engineering applications A Noronha, P Vilaça, M Rocha BMC bioinformatics 15, 1-13, 2014 | 10 | 2014 |
| Recon 3D: A resource enabling a three-dimensional view of human metabolism and disease E Brunk, S Sahoo, D Zielinski, A Altunkaya, N Mih, A Prlic, A Sastry, ... Abstracts of Papers of the American Chemical Society 253, 2017 | 3 | 2017 |
| Leigh map: a novel diagnostic resource for mitochondrial disease J Rahman, A Noronha, I Thiele, S Rahman Neuromuscular Disorders 27, S19, 2017 | 2 | 2017 |
| Network Visualization Tools to Enhance Metabolic Engineering Platforms A Noronha, P Vilaça, M Rocha 7th International Conference on Practical Applications of Computational …, 2013 | 2 | 2013 |
| Visualization Plugin for Optflux: tools for the creation of metabolic layouts and analysis of flux distributions PRC Vilaça, AMS Noronha, I Rocha, M Rocha | 1 | 2014 |
| DEVELOPMENT OF A COMPUTATIONAL RESOURCE FOR PERSONALIZED DIETARY RECOMMENDATIONS A Noronha Unilu-University of Luxembourg, Esch-sur-Alzette, Luxembourg, 2018 | | 2018 |
| Computational modeling of diet-microbiota-host interactions A Heinken, S Magnusdottir, S Bauer, D Ravcheev, A Noronha, B Pierson, ... ANNALS OF NUTRITION AND METABOLISM 67, 221-221, 2015 | | 2015 |
| Development of a computational platform for the visualization of metabolic models AMS Noronha PQDT-Global, 2013 | | 2013 |
| Comparative evaluation of atom mapping algorithms for balanced metabolic reactions: application to Recon 3D G Preciat, LRP El Assal, A Noronha, I Thiele, HS Haraldsdóttir, ... | | |
| Metabolic visualisation of Recon3Map with Minerva I Thiele, RMT Fleming, A Noronha | | |
Miguel RochaAssociate Professor, Dept. Informatics and Centre Biological Engineering, Universidade do MinhoPatvirtintas el. paštas di.uminho.pt