| Single-molecule analysis reveals cooperative stimulation of Rad51 filament nucleation and growth by mediator proteins O Belan, C Barroso, A Kaczmarczyk, R Anand, S Federico, N O’Reilly, ... Molecular cell 81 (5), 1058-1073. e7, 2021 | 72 | 2021 |
| Chromatin fibers stabilize nucleosomes under torsional stress A Kaczmarczyk, H Meng, O Ordu, J Noort, NH Dekker Nature communications 11 (1), 126, 2020 | 59 | 2020 |
| HELQ is a dual-function DSB repair enzyme modulated by RPA and RAD51 R Anand, E Buechelmaier, O Belan, M Newton, A Vancevska, ... Nature 601 (7892), 268-273, 2022 | 55 | 2022 |
| Single-molecule force spectroscopy on histone H4 tail-cross-linked chromatin reveals fiber folding A Kaczmarczyk, A Allahverdi, TB Brouwer, L Nordenskiöld, NH Dekker, ... Journal of Biological Chemistry 292 (42), 17506-17513, 2017 | 44 | 2017 |
| A critical role for linker DNA in higher-order folding of chromatin fibers T Brouwer, C Pham, A Kaczmarczyk, WJ De Voogd, M Botto, P Vizjak, ... Nucleic acids research 49 (5), 2537-2551, 2021 | 31 | 2021 |
| Probing chromatin structure with magnetic tweezers A Kaczmarczyk, TB Brouwer, C Pham, NH Dekker, J van Noort Nanoscale Imaging: Methods and Protocols, 297-323, 2018 | 29 | 2018 |
| Rigid basepair Monte Carlo simulations of one-start and two-start chromatin fiber unfolding by force BE de Jong, TB Brouwer, A Kaczmarczyk, B Visscher, J van Noort Biophysical Journal 115 (10), 1848-1859, 2018 | 21 | 2018 |
| Search and processing of Holliday junctions within long DNA by junction-resolving enzymes AP Kaczmarczyk, AC Déclais, MD Newton, SJ Boulton, DMJ Lilley, ... Nature Communications 13 (1), 5921, 2022 | 17 | 2022 |
| Visualization of direct and diffusion-assisted RAD51 nucleation by full-length human BRCA2 protein O Belan, L Greenhough, L Kuhlen, R Anand, A Kaczmarczyk, DT Gruszka, ... Molecular cell 83 (16), 2925-2940. e8, 2023 | 16 | 2023 |
| Unravelling DNA Organization with Single-Molecule Force Spectroscopy Using Magnetic Tweezers TB Brouwer, A Kaczmarczyk, I Zarguit, C Pham, RT Dame, J van Noort Bacterial Chromatin: Methods and Protocols, 535-572, 2024 | 15 | 2024 |
| Generation of versatile ss-dsDNA hybrid substrates for single-molecule analysis O Belan, G Moore, A Kaczmarczyk, MD Newton, R Anand, SJ Boulton, ... STAR protocols 2 (2), 100588, 2021 | 10 | 2021 |
| Nucleosome stacking in chromatin fibers probed with single-molecule force-and torque-spectroscopy A Kaczmarczyk Leiden University, 2019 | 8 | 2019 |
| Nanoscale imaging: methods and protocols A Kaczmarczyk, TB Brouwer, J van Noort Springer, 2018 | 5 | 2018 |
| FANCD2–FANCI surveys DNA and recognizes double-to single-stranded junctions P Alcón, AP Kaczmarczyk, KK Ray, T Liolios, G Guilbaud, T Sijacki, ... Nature 632 (8027), 1165-1173, 2024 | 4 | 2024 |
| Rapid Clinical Diagnostic Viral Detection with Saliva by a Novel Single Step Nested Mango-NASBA Assay H Iino, A Abdolahzadeh, E Dolgosheina, P Poudevigne-Durance, ... Biophysical Journal 120 (3), 196a, 2021 | 2 | 2021 |
| Author Correction: FANCD2-FANCI surveys DNA and recognizes double-to single-stranded junctions P Alcón, AP Kaczmarczyk, KK Ray, T Liolios, G Guilbaud, T Sijacki, ... Nature, 2025 | | 2025 |
| FANCD2-FANCI is a sliding DNA clamp that specifically recognizes ss/ds-DNA junctions P Alcon, A Kaczmarczyk, T Sijacki, L Passmore, DS Rueda Biophysical Journal 123 (3), 167a, 2024 | | 2024 |
| Finding and cleaving a holliday junction in long double-stranded DNA: a complete resolution reaction trajectory by single-molecule tracking A Kaczmarczyk, AC Déclais, MD Newton, DMJ Lilley, DS Rueda Biophysical Journal 121 (3), 23a, 2022 | | 2022 |
| Single-Molecule Investigation of Rad-51 Presynaptic Filament Assembly and the Role of Mediator Proteins O Belan, C Barroso, A Kaczmarczyk, R Anand, S Federico, N O’Reilly, ... Biophysical Journal 120 (3), 33a, 2021 | | 2021 |
| Linker DNA Length Defines the Structure of Chromatin Fibers TB Brouwer, A Kaczmarczyk, N Hermans, M Botto, J van Noort Biophysical Journal 114 (3), 256a, 2018 | | 2018 |
