Chris Creevey

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Sharon HuwsProfessor in Animal Science and Microbiology, Institute of Global Food Security, Queens UniversityPatvirtintas el. paštas qub.ac.uk
Peer BorkDirector of EMBL HeidelbergPatvirtintas el. paštas embl.de
Christian von MeringProfessor of Computational Biology, University of Zurich and Swiss Institute of BioinformaticsPatvirtintas el. paštas imls.uzh.ch
Mark WilkinsonThe Natural History MuseumPatvirtintas el. paštas nhm.ac.uk
Sinead M. WatersSenior researcher in Molecular Biology, Teagasc Animal and Bioscience Department, Grange, Dunsany, Co. MeathPatvirtintas el. paštas teagasc.ie
Jean MullerAssociate Professor of Genetics, Strasbourg University, Inserm, UMR_S 1112Patvirtintas el. paštas unistra.fr
Karen Siu-TingQueen's University BelfastPatvirtintas el. paštas qub.ac.uk
Toby WilkinsonUniversity of WuerzburgPatvirtintas el. paštas uni-wuerzburg.de
Davide PisaniProfessor of Phylogenomics. Schools of Biological & Earth Sciences. University of Bristol (UK)Patvirtintas el. paštas bristol.ac.uk
Michael Kuhnresearch staff scientist & research coordinator in the lab of Peer Bork, EMBLPatvirtintas el. paštas embl.de
Lars Juhl JensenUniversity of CopenhagenPatvirtintas el. paštas cpr.ku.dk
Alexander RothUniversity of ZurichPatvirtintas el. paštas uzh.ch
Professor Mary J. O'ConnellThe University Of NottinghamPatvirtintas el. paštas nottingham.ac.uk
Sinead LeahySenior Scientist, AgResearch LimitedPatvirtintas el. paštas agresearch.co.nz
David FitzpatrickMaynooth UniversityPatvirtintas el. paštas mu.ie
Linda Boniface OyamaLecturer Queen's University of BelfastPatvirtintas el. paštas qub.ac.uk
Francesco RubinoCNR - ITB, Bari, ItalyPatvirtintas el. paštas cnr.it
Joan EdwardsPalital Feed Additives; Anaerobic Fungi NetworkPatvirtintas el. paštas palital.com
Wayne AubreyAberystwyth UniversityPatvirtintas el. paštas aber.ac.uk
Matthew S McCabeTeagascPatvirtintas el. paštas teagasc.ie

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Chris Creevey

Professor of Computational Biology, Queen’s University Belfast

Patvirtintas el. paštas qub.ac.uk - Pagrindinis puslapis

Computational Biology metagenomics transcriptomics phylogenetics


Pavadinimas Rūšiuoti pagal šaltinius Rūšiuoti pagal metus Rūšiuoti pagal pavadinimą	Cituota Cituota	Metai
STRING 8—a global view on proteins and their functional interactions in 630 organisms LJ Jensen, M Kuhn, M Stark, S Chaffron, C Creevey, J Muller, T Doerks, ... Nucleic acids research 37 (suppl_1), D412-D416, 2009	2961	2009
Toward automatic reconstruction of a highly resolved tree of life FD Ciccarelli, T Doerks, C Von Mering, CJ Creevey, B Snel, P Bork Science 311 (5765), 1283, 2006	1866	2006
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified T Keane, C Creevey, M Pentony, T Naughton, J Mclnerney BMC evolutionary biology 6 (1), 29, 2006	1218	2006
eggNOG v4. 0: nested orthology inference across 3686 organisms S Powell, K Forslund, D Szklarczyk, K Trachana, A Roth, J Huerta-Cepas, ... Nucleic acids research 42 (D1), D231-D239, 2014	642	2014
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ... Nature biotechnology 36 (4), 359-367, 2018	537	2018
Genome-wide experimental determination of barriers to horizontal gene transfer R Sorek, Y Zhu, CJ Creevey, MP Francino, P Bork, EM Rubin Science 318 (5855), 1449, 2007	487	2007
Addressing global ruminant agricultural challenges through understanding the rumen microbiome: past, present, and future SA Huws, CJ Creevey, LB Oyama, I Mizrahi, SE Denman, M Popova, ... Frontiers in microbiology 9, 2161, 2018	417	2018
Clann: investigating phylogenetic information through supertree analyses CJ Creevey, JO McInerney Bioinformatics 21 (3), 390-392, 2005	231	2005
Determining the culturability of the rumen bacterial microbiome CJ Creevey, WJ Kelly, G Henderson, SC Leahy Microbial biotechnology 7 (5), 467-479, 2014	229	2014
Comparative metagenomic and metatranscriptomic analyses reveal the breed effect on the rumen microbiome and its associations with feed efficiency in beef cattle F Li, TCA Hitch, Y Chen, CJ Creevey, LL Guan Microbiome 7, 1-21, 2019	224	2019
Genome phylogenies indicate a meaningful α-proteobacterial phylogeny and support a grouping of the mitochondria with the Rickettsiales DA Fitzpatrick, CJ Creevey, JO McInerney Molecular biology and evolution 23 (1), 74-85, 2006	182	2006
CowPI: a rumen microbiome focussed version of the PICRUSt functional inference software TJ Wilkinson, SA Huws, JE Edwards, AH Kingston-Smith, K Siu-Ting, ... Frontiers in microbiology 9, 1095, 2018	161	2018
The Opisthokonta and the Ecdysozoa may not be clades: stronger support for the grouping of plant and animal than for animal and fungi and stronger support for the Coelomata … GK Philip, CJ Creevey, JO McInerney Molecular biology and evolution 22 (5), 1175-1184, 2005	155	2005
Does a tree–like phylogeny only exist at the tips in the prokaryotes? CJ Creevey, DA Fitzpatrick, GK Philip, RJ Kinsella, MJ O'Connell, ... Proceedings of the Royal Society of London. Series B: Biological Sciences …, 2004	149	2004
RNA-seq analysis of differential gene expression in liver from lactating dairy cows divergent in negative energy balance M McCabe, S Waters, D Morris, D Kenny, D Lynn, C Creevey BMC genomics 13, 1-11, 2012	131	2012
The shape of supertrees to come: tree shape related properties of fourteen supertree methods M Wilkinson, JA Cotton, C Creevey, O Eulenstein, SR Harris, FJ Lapointe, ... Systematic biology 54 (3), 419-431, 2005	126	2005
Temporal dynamics of the metabolically active rumen bacteria colonizing fresh perennial ryegrass SA Huws, JE Edwards, CJ Creevey, P Rees Stevens, W Lin, SE Girdwood, ... FEMS Microbiology Ecology 92 (1), fiv137, 2016	125	2016
Fatty acid biosynthesis in Mycobacterium tuberculosis: lateral gene transfer, adaptive evolution, and gene duplication RJ Kinsella, DA Fitzpatrick, CJ Creevey, JO McInerney Proceedings of the National Academy of Sciences 100 (18), 10320, 2003	124	2003
Visualization of multiple alignments, phylogenies and gene family evolution JB Procter, J Thompson, I Letunic, C Creevey, F Jossinet, GJ Barton Nature methods 7 (Suppl 3), S16-S25, 2010	118	2010
Rumen methanogenic genotypes differ in abundance according to host residual feed intake phenotype and diet type CA Carberry, SM Waters, DA Kenny, CJ Creevey Applied and environmental microbiology 80 (2), 586-594, 2014	112	2014

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