| Transformer-based protein generation with regularized latent space optimization E Castro, A Godavarthi, J Rubinfien, K Givechian, D Bhaskar, ... Nature Machine Intelligence, 1-12, 2022 | 73 | 2022 |
| 3D printed self-adhesive PEGDA–PAA hydrogels as modular components for soft actuators and microfluidics TM Valentin, EM DuBois, CE Machnicki, D Bhaskar, FR Cui, IY Wong Polymer Chemistry 10 (16), 2015-2028, 2019 | 65 | 2019 |
| Analyzing collective motion with machine learning and topology D Bhaskar, A Manhart, J Milzman, JT Nardini, KM Storey, CM Topaz, ... Chaos: An Interdisciplinary Journal of Nonlinear Science 29 (12), 2019 | 55 | 2019 |
| Coupling mechanical tension and GTPase signaling to generate cell and tissue dynamics C Zmurchok, D Bhaskar, L Edelstein-Keshet Physical biology 15 (4), 046004, 2018 | 49 | 2018 |
| Breast Cancer Cells Transition from Mesenchymal to Amoeboid Migration in Tunable Three-Dimensional Silk–Collagen Hydrogels AS Khoo, TM Valentin, SE Leggett, D Bhaskar, EM Bye, S Benmelech, ... ACS biomaterials science & engineering 5 (9), 4341-4354, 2019 | 45 | 2019 |
| Motility-limited aggregation of mammary epithelial cells into fractal-like clusters SE Leggett, ZJ Neronha, D Bhaskar, JY Sim, TM Perdikari, IY Wong Proceedings of the National Academy of Sciences 116 (35), 17298-17306, 2019 | 43 | 2019 |
| Topological data analysis of collective and individual epithelial cells using persistent homology of loops D Bhaskar, WY Zhang, IY Wong Soft Matter 17 (17), 4653-4664, 2021 | 20 | 2021 |
| Polarization and migration in the zebrafish posterior lateral line system H Knutsdottir, C Zmurchok, D Bhaskar, E Palsson, D Dalle Nogare, ... PLoS computational biology 13 (4), e1005451, 2017 | 20 | 2017 |
| Cell cycle controls long-range calcium signaling in the regenerating epidermis JL Moore, D Bhaskar, F Gao, C Matte-Martone, S Du, E Lathrop, ... Journal of Cell Biology 222 (7), e202302095, 2023 | 16 | 2023 |
| A methodology for morphological feature extraction and unsupervised cell classification D Bhaskar, D Lee, H Knútsdóttir, C Tan, MH Zhang, P Dean, C Roskelley, ... bioRxiv, 623793, 2019 | 15 | 2019 |
| Learnable filters for geometric scattering modules A Tong, F Wenkel, D Bhaskar, K Macdonald, J Grady, M Perlmutter, ... IEEE Transactions on Signal Processing, 2024 | 11 | 2024 |
| Current trends in artificial intelligence in reproductive endocrinology D Bhaskar, TA Chang, S Wang Current Opinion in Obstetrics and Gynecology 34 (4), 159-163, 2022 | 10 | 2022 |
| ReLSO: a transformer-based model for latent space optimization and generation of proteins E Castro, A Godavarthi, J Rubinfien, KB Givechian, D Bhaskar, ... arXiv preprint arXiv:2201.09948, 2022 | 9 | 2022 |
| Topological data analysis of spatial patterning in heterogeneous cell populations: clustering and sorting with varying cell-cell adhesion D Bhaskar, WY Zhang, A Volkening, B Sandstede, IY Wong npj Systems Biology and Applications 9 (1), 43, 2023 | 8 | 2023 |
| Molecular graph generation via geometric scattering D Bhaskar, J Grady, E Castro, M Perlmutter, S Krishnaswamy 2022 IEEE 32nd International Workshop on Machine Learning for Signal …, 2022 | 8 | 2022 |
| Diffusion curvature for estimating local curvature in high dimensional data D Bhaskar, K MacDonald, O Fasina, D Thomas, B Rieck, I Adelstein, ... Advances in Neural Information Processing Systems 35, 21738-21749, 2022 | 7 | 2022 |
| Inferring dynamic regulatory interaction graphs from time series data with perturbations D Bhaskar, DS Magruder, M Morales, E De Brouwer, A Venkat, F Wenkel, ... Learning on Graphs Conference, 22: 1-22: 21, 2024 | 4 | 2024 |
| Multiscale geometric and topological analyses for characterizing and predicting immune responses from single cell data A Venkat, D Bhaskar, S Krishnaswamy Trends in Immunology 44 (7), 551-563, 2023 | 4 | 2023 |
| Capturing spatiotemporal signaling patterns in cellular data with geometric scattering trajectory homology D Bhaskar, J Moore, F Gao, B Rieck, F Khasawneh, E Munch, V Greco, ... | 3 | 2023 |
| G2 stem cells orchestrate time-directed, long-range coordination of calcium signaling during skin epidermal regeneration JL Moore, F Gao, C Matte-Martone, S Du, E Lathrop, S Ganesan, L Shao, ... Biorxiv, 2021.10. 12.464066, 2021 | 3 | 2021 |
Smita KrishnaswamyYale UniversityPatvirtintas el. paštas yale.edu
