Andrea Pagnani

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Riccardo Zecchinaprofessor, theoretical physics, Bocconi UniversityPatvirtintas el. paštas unibocconi.it
Martin WeigtSorbonne Université Paris (former Université Pierre & Marie Curie)Patvirtintas el. paštas upmc.fr
Alfredo BraunsteinDISAT, Politecnico di TorinoPatvirtintas el. paštas polito.it
Chris SanderHarvard Medical School, Broad Institute, MGH, Dana-Farber Cancer Institute, Memorial Sloan KetteringPatvirtintas el. paštas sanderlab.org
Giorgio ParisiProfessor of Theoretical Physics, Rome I University "La Sapienza"Patvirtintas el. paštas roma1.infn.it
Debora MarksSystems Biology, Harvard Medical School, Broad Institute of Harvard and MITPatvirtintas el. paštas hms.harvard.edu
Roberto MuletFacultad de Fisica, Universidad de la HabanaPatvirtintas el. paštas fisica.uh.cu
Enzo MarinariProfessor of Theoretical Physics, Sapienza Università di RomaPatvirtintas el. paštas uniroma1.it
Carlo BaldassiBocconi University; ELLIS scholarPatvirtintas el. paštas unibocconi.it
Thomas A. HopfScientific ConsultantPatvirtintas el. paštas thomashopf.com
Christoph FeinauerIsomorphic LabsPatvirtintas el. paštas isomorphiclabs.com
Bryan J. LuntPhD Candidate, University of Illinois as Urbana-ChampaignPatvirtintas el. paštas illinois.edu
Faruck MorcosUniversity of Texas at Dallas - Dept. Biological SciencesPatvirtintas el. paštas utdallas.edu
Jose OnuchicCTBP Rice UniversityPatvirtintas el. paštas rice.edu
Paolo ProveroProfessor, University of TurinPatvirtintas el. paštas unito.it
Marco ZamparoUniversità del Piemonte OrientalePatvirtintas el. paštas uniupo.it
Federico Ricci-TersenghiProfessor of Theoretical Physics, "La Sapienza" University, RomaPatvirtintas el. paštas roma1.infn.it
Pier Paolo PandolfiDirector, Cancer Center and Cancer Research Institute, Beth Israel Deaconess Medical CenterPatvirtintas el. paštas bidmc.harvard.edu
Florian KarrethH. Lee Moffitt Cancer CenterPatvirtintas el. paštas moffitt.org
Riccardo TaulliUniversity of TorinoPatvirtintas el. paštas unito.it

Stebėti

Andrea Pagnani

Professor at DISAT - Politecnico di Torino, and PI at the IIGM

Patvirtintas el. paštas polito.it - Pagrindinis puslapis

Statistical physics combinatorial optimization bioinformatics biological modeling statistical inference


Pavadinimas Rūšiuoti pagal šaltinius Rūšiuoti pagal metus Rūšiuoti pagal pavadinimą	Cituota Cituota	Metai
Direct-coupling analysis of residue coevolution captures native contacts across many protein families F Morcos, A Pagnani, B Lunt, A Bertolino, DS Marks, C Sander, ... Proceedings of the National Academy of Sciences 108 (49), E1293-E1301, 2011	1593	2011
Protein 3D structure computed from evolutionary sequence variation DS Marks, LJ Colwell, R Sheridan, TA Hopf, A Pagnani, R Zecchina, ... PLoS One 6 (12), e28766, 2011	1287	2011
Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments U Ala, FA Karreth, C Bosia, A Pagnani, R Taulli, V Léopold, Y Tay, ... Proceedings of the National Academy of Sciences 110 (18), 7154-7159, 2013	351	2013
A critical assessment of Mus musculus gene function prediction using integrated genomic evidence L Peña-Castillo, M Tasan, CL Myers, H Lee, T Joshi, C Zhang, Y Guan, ... Genome biology 9 (1), 1-19, 2008	304	2008
Coloring random graphs R Mulet, A Pagnani, M Weigt, R Zecchina Physical review letters 89 (26), 268701, 2002	252	2002
Genome-wide analysis identifies a functional association of Tet1 and Polycomb repressive complex 2 in mouse embryonic stem cells F Neri, D Incarnato, A Krepelova, S Rapelli, A Pagnani, R Zecchina, ... Genome biology 14 (8), R91, 2013	206	2013
Fast and accurate multivariate Gaussian modeling of protein families: Predicting residue contacts and protein-interaction partners C Baldassi, M Zamparo, C Feinauer, A Procaccini, R Zecchina, M Weigt, ... PloS one 9 (3), e92721, 2014	183	2014
Perturbation biology: inferring signaling networks in cellular systems EJ Molinelli, A Korkut, W Wang, ML Miller, NP Gauthier, X Jing, P Kaushik, ... PLoS computational biology 9 (12), e1003290, 2013	178	2013
Critical exponents of the KPZ equation via multi-surface coding numerical simulations E Marinari, A Pagnani, G Parisi Journal of Physics A: Mathematical and General 33 (46), 8181, 2000	172	2000
Modelling competing endogenous RNA networks C Bosia, A Pagnani, R Zecchina PloS one 8 (6), e66609, 2013	145	2013
Simultaneous identification of specifically interacting paralogs and interprotein contacts by direct coupling analysis T Gueudré, C Baldassi, M Zamparo, M Weigt, A Pagnani Proceedings of the National Academy of Sciences 113 (43), 12186-12191, 2016	136	2016
Somatic mutagenesis in satellite cells associates with human skeletal muscle aging I Franco, A Johansson, K Olsson, P Vrtačnik, P Lundin, HT Helgadottir, ... Nature communications 9 (1), 1-12, 2018	135	2018
Simultaneous reconstruction of multiple signaling pathways via the prize-collecting Steiner forest problem N Tuncbag, A Braunstein, A Pagnani, SSC Huang, J Chayes, C Borgs, ... Journal of computational biology 20 (2), 124-136, 2013	134	2013
Width distributions and the upper critical dimension of Kardar-Parisi-Zhang interfaces E Marinari, A Pagnani, G Parisi, Z Rácz Physical review E 65 (2), 026136, 2002	133	2002
Polynomial iterative algorithms for coloring and analyzing random graphs A Braunstein, R Mulet, A Pagnani, M Weigt, R Zecchina Physical Review E 68 (3), 036702, 2003	125	2003
Glassy transition in a disordered model for the RNA secondary structure A Pagnani, G Parisi, F Ricci-Tersenghi Physical review letters 84 (9), 2026, 2000	95	2000
Improving contact prediction along three dimensions C Feinauer, MJ Skwark, A Pagnani, E Aurell PLoS computational biology 10 (10), e1003847, 2014	89	2014
Efficient generative modeling of protein sequences using simple autoregressive models J Trinquier, G Uguzzoni, A Pagnani, F Zamponi, M Weigt Nature Communications 12, 2021	86	2021
Numerical estimate of the Kardar-Parisi-Zhang universality class in (2+ 1) dimensions A Pagnani, G Parisi Physical Review E 92 (1), 010101, 2015	85	2015
Scalings of domain wall energies in two dimensional Ising spin glasses C Amoruso, E Marinari, OC Martin, A Pagnani Physical review letters 91 (8), 087201, 2003	75	2003

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