| A genomic view of the reef-building coral Porites lutea and its microbial symbionts SJ Robbins, CM Singleton, CX Chan, LF Messer, AU Geers, H Ying, ... Nature microbiology 4 (12), 2090-2100, 2019 | 234 | 2019 |
| A phylogenomic and ecological analysis of the globally abundant Marine Group II archaea (Ca. Poseidoniales ord. nov.) C Rinke, F Rubino, LF Messer, N Youssef, DH Parks, M Chuvochina, ... The ISME journal 13 (3), 663-675, 2019 | 169 | 2019 |
| CowPI: a rumen microbiome focussed version of the PICRUSt functional inference software TJ Wilkinson, SA Huws, JE Edwards, AH Kingston-Smith, K Siu-Ting, ... Frontiers in microbiology 9, 1095, 2018 | 161 | 2018 |
| HmtDB, a genomic resource for mitochondrion-based human variability studies F Rubino, R Piredda, FM Calabrese, D Simone, M Lang, C Calabrese, ... Nucleic acids research 40 (D1), D1150-D1159, 2012 | 117 | 2012 |
| Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome F Rubino, C Carberry, SM Waters, D Kenny, MS McCabe, CJ Creevey The ISME journal 11 (4), 932-944, 2017 | 97 | 2017 |
| Chemotaxis shapes the microscale organization of the ocean’s microbiome JB Raina, BS Lambert, DH Parks, C Rinke, N Siboni, A Bramucci, ... Nature 605 (7908), 132-138, 2022 | 85 | 2022 |
| A microfluidics-based in situ chemotaxis assay to study the behaviour of aquatic microbial communities BS Lambert, JB Raina, VI Fernandez, C Rinke, N Siboni, F Rubino, ... Nature Microbiology 2 (10), 1344-1349, 2017 | 71 | 2017 |
| Resistome analysis of global livestock and soil microbiomes K Lawther, FG Santos, LB Oyama, F Rubino, S Morrison, CJ Creevey, ... Frontiers in microbiology 13, 897905, 2022 | 20 | 2022 |
| Microbiomes attached to fresh perennial ryegrass are temporally resilient and adapt to changing ecological niches SA Huws, JE Edwards, W Lin, F Rubino, M Alston, D Swarbreck, S Caim, ... Microbiome 9, 1-17, 2021 | 18 | 2021 |
| MGkit: Metagenomic framework for the study of microbial communities F Rubino, CJ Creevey Figshare. Poste, 2014 | 17 | 2014 |
| GIDL: a rule based expert system for GenBank Intelligent Data Loading into the Molecular Biodiversity database P Pannarale, D Catalano, G De Caro, G Grillo, P Leo, G Pappadà, ... BMC bioinformatics 13, 1-14, 2012 | 15 | 2012 |
| M Waters, S., Kenny, D., McCabe, MS, and Creevey, CJ (2017). Divergent functional isoforms drive niche specialisation for nutrient acquisition and use in rumen microbiome F Rubino, C Carberry ISME J 11, 932-944, 0 | 14 | |
| Human mtDNA site‐specific variability values can act as haplogroup markers M Accetturo, M Santamaria, D Lascaro, F Rubino, A Achilli, A Torroni, ... Human mutation 27 (9), 965-974, 2006 | 13 | 2006 |
| Towards the next-generation models of the rumen microbiome for enhancing predictive power and guiding sustainable production strategies R Muñoz-Tamayo, M Davoudkhani, I Fakih, CE Robles-Rodriguez, ... animal 17, 100984, 2023 | 8 | 2023 |
| An efficient algorithm for approximating geodesic distances in tree space S Battagliero, G Puglia, S Vicario, F Rubino, G Scioscia, P Leo IEEE/ACM Transactions on Computational Biology and Bioinformatics 8 (5 …, 2010 | 8 | 2010 |
| PPNEMA: A Resource of Plant‐Parasitic Nematodes Multialigned Ribosomal Cistrons F Rubino, A Voukelatou, F De Luca, C De Giorgi, M Attimonelli International Journal of Plant Genomics 2008 (1), 387812, 2008 | 6 | 2008 |
| Integrating microbial abundance time series with fermentation dynamics of the rumen microbiome via mathematical modelling M Davoudkhani, F Rubino, CJ Creevey, S Ahvenjärvi, AR Bayat, I Tapio, ... Plos one 19 (3), e0298930, 2024 | 3 | 2024 |
| Correction: A phylogenomic and ecological analysis of the globally abundant Marine Group II archaea (Ca. Poseidoniales ord. nov.) C Rinke, F Rubino, LF Messer, N Youssef, DH Parks, M Chuvochina, ... The ISME journal 14 (3), 878-878, 2020 | 2 | 2020 |
| MBLabDB: a social database for molecular biodiversity data F Licciulli, D Catalano, D D'Elia, G De Caro, G Grillo, P Leo, G Mulè, ... EMBnet. journal 18 (B), 121-123, 2012 | 2 | 2012 |
| Shifts in rumen bacterial population of dairy cows fed two potential methane mitigating additives JB Veneman, TJ Wilkinson, F Rubino, E Pinloche, KJ Hart, S Muetzel, ... INRA-Rowett: Aberdeen, Scotland, 2014 | 1 | 2014 |
Chris CreeveyProfessor of Computational Biology, Queen’s University BelfastPatvirtintas el. paštas qub.ac.uk
