Jai Ram Rideout

Cituota

	Visi	Nuo 2020
Šaltiniai	27559	25341
h-rodyklė	21	19
i10-rodyklė	28	24

7000

3500

1750

5250

20152016201720182019202020212022202320242025116 227 336 357 984 2557 4115 5268 5676 6517 1208

Viešas pasiekiamumas

Peržiūrėti viską

18 straipsnių

0 straipsnių

pasiekiami

nepasiekiami

Pagal finansavimo įpareigojimus

Bendraautoriai

J Gregory CaporasoNorthern Arizona UniversityPatvirtintas el. paštas nau.edu
Evan BolyenSenior Research Software Engineer, Northern Arizona UniversityPatvirtintas el. paštas nau.edu
Rob KnightWolfe Family Chair at Rady Children's; Director, Center for Microbiome Innovation; Professor, UCSDPatvirtintas el. paštas ucsd.edu
Matthew Ryan DillonStaff Software EngineerPatvirtintas el. paštas akdillon.net
Daniel McDonaldAmerican Gut, Knight Lab, Department of Pediatrics, UCSDPatvirtintas el. paštas ucsd.edu
B KaehlerSchool of Science, University of New South WalesPatvirtintas el. paštas adfa.edu.au
Jose C. ClementeAssociate Professor, Icahn School of Medicine at Mount SinaiPatvirtintas el. paštas mssm.edu
Gavin HuttleyProfessor of Computational Genomics, Australian National UniversityPatvirtintas el. paštas anu.edu.au
Antonio GonzálezProgrammer Analyst, UC San DiegoPatvirtintas el. paštas ucsd.edu
Luke K UrsellBiota TechnologyPatvirtintas el. paštas biota.com
Jose A Navas-MolinaUniversity of California, San DiegoPatvirtintas el. paštas eng.ucsd.edu
Folker MeyerUniversity of Duisburg-Essen; University Hospital EssenPatvirtintas el. paštas uni-due.de
William A WaltersPost-doc, Cornell UniversityPatvirtintas el. paštas colorado.edu
Jack A GilbertUniversity of California, San DiegoPatvirtintas el. paštas ucsd.edu
Yoshiki Vázquez-BaezaBiomeSensePatvirtintas el. paštas biomesense.com
Andreas WilkeArgonne National LaboratoryPatvirtintas el. paštas anl.gov
Sean M. GibbonsAssociate Professor, Institute for Systems BiologyPatvirtintas el. paštas isbscience.org
Evguenia KopylovaHost-microbiome data analysis | Managing Director, Clarity GenomicsPatvirtintas el. paštas clarity-genomics.com
Jonathan W. LeffXcoda, LLCPatvirtintas el. paštas xcodaconsulting.com
Gilberto FloresPortland State University, University of Colorado, California State University, NorthridgePatvirtintas el. paštas csun.edu

Stebėti

Jai Ram Rideout

One Codex

Patvirtintas el. paštas onecodex.com

Bioinformatics Microbiome Computer Science Software Engineering


Pavadinimas Rūšiuoti pagal šaltinius Rūšiuoti pagal metus Rūšiuoti pagal pavadinimą	Cituota Cituota	Metai
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019	17584	2019
Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin NA Bokulich, BD Kaehler, JR Rideout, M Dillon, E Bolyen, R Knight, ... Microbiome 6, 1-17, 2018	4640	2018
QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... PeerJ Preprints, 2018	1040	2018
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome D McDonald, JC Clemente, J Kuczynski, JR Rideout, J Stombaugh, ... Gigascience 1 (1), 2047-217X-1-7, 2012	832	2012
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences JR Rideout, Y He, JA Navas-Molina, WA Walters, LK Ursell, SM Gibbons, ... PeerJ 2, e545, 2014	645	2014
Qiita: rapid, web-enabled microbiome meta-analysis A Gonzalez, JA Navas-Molina, T Kosciolek, D McDonald, ... Nature methods 15 (10), 796-798, 2018	611	2018
Temporal variability is a personalized feature of the human microbiome GE Flores, JG Caporaso, JB Henley, JR Rideout, D Domogala, J Chase, ... Genome biology 15, 1-13, 2014	478	2014
The interpersonal and intrapersonal diversity of human-associated microbiota in key body sites LK Ursell, JC Clemente, JR Rideout, D Gevers, JG Caporaso, R Knight Journal of Allergy and Clinical Immunology 129 (5), 1204-1208, 2012	412	2012
q2-longitudinal: longitudinal and paired-sample analyses of microbiome data NA Bokulich, MR Dillon, Y Zhang, JR Rideout, E Bolyen, H Li, PS Albert, ... MSystems 3 (6), 10.1128/msystems. 00219-18, 2018	234	2018
QIIME 2: reproducible, interactive, scalable, and extensible microbiome data science. PeerJ E Bolyen, JR Rideout, MR Dillon, NA Bokulich, C Abnet, GA Al-Ghalith, ... Inc 6, e27295v2, 2018	207	2018
Stability of operational taxonomic units: an important but neglected property for analyzing microbial diversity Y He, JG Caporaso, XT Jiang, HF Sheng, SM Huse, JR Rideout, ... Microbiome 3, 1-10, 2015	201	2015
The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome. Gigascience 1: 7 D McDonald, JC Clemente, J Kuczynski, JR Rideout, J Stombaugh, ...	146	2012
mockrobiota: a public resource for microbiome bioinformatics benchmarking NA Bokulich, JR Rideout, WG Mercurio, A Shiffer, B Wolfe, CF Maurice, ... Msystems 1 (5), 10.1128/msystems. 00062-16, 2016	73	2016
Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses J Fouquier, JR Rideout, E Bolyen, J Chase, A Shiffer, D McDonald, ... Microbiome 4, 1-10, 2016	67	2016
Gut microbial and short-chain fatty acid profiles in adults with chronic constipation before and after treatment with lubiprostone DW Kang, JK DiBaise, ZE Ilhan, MD Crowell, JR Rideout, JG Caporaso, ... Anaerobe 33, 33-41, 2015	65	2015
Keemei: cloud-based validation of tabular bioinformatics file formats in Google Sheets JR Rideout, JH Chase, E Bolyen, G Ackermann, A González, R Knight, ... Gigascience 5 (1), s13742-016-0133-6, 2016	57	2016
Optimizing taxonomic classification of marker gene amplicon sequences NA Bokulich, BD Kaehler, JR Rideout, M Dillon, E Bolyen, R Knight, ... PeerJ Preprints 6, e3208v2, 2018	44	2018
A standardized, extensible framework for optimizing classification improves marker-gene taxonomic assignments NA Bokulich, JR Rideout, E Kopylova, E Bolyen, J Patnode, Z Ellett, ... PeerJ PrePrints 3, e934v2, 2015	36	2015
Sunpy: A python package for solar physics S Mumford, N Freij, S Christe, J Ireland, F Mayer, V Hughitt, A Shih, ... Journal of Open Source Software 5 (46), 2020	34	2020
Domestic canines do not display evidence of gut microbial dysbiosis in the presence of Clostridioides (Clostridium) difficile, despite cellular susceptibility to its toxins NE Stone, AE Nunnally, V Jimenez Jr, EK Cope, JW Sahl, K Sheridan, ... Anaerobe 58, 53-72, 2019	27	2019

Sistema negali atlikti operacijos. Bandykite vėliau dar kartą.

Straipsniai 1–20

Šaltinių per metus

Dubliuoti šaltiniai

Sujungti šaltiniai

Pridėti bendraautoriusBendraautoriai

Stebėti

Cituota

Bendraautoriai