| SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 2020 | 254 | 2020 |
| Path2Models: large-scale generation of computational models from biochemical pathway maps F Büchel, N Rodriguez, N Swainston, C Wrzodek, T Czauderna, R Keller, ... BMC systems biology 7, 1-19, 2013 | 190 | 2013 |
| JSBML 1.0: providing a smorgasbord of options to encode systems biology models N Rodriguez, A Thomas, L Watanabe, IY Vazirabad, V Kofia, HF Gómez, ... Bioinformatics 31 (20), 3383-3386, 2015 | 47 | 2015 |
| The systems biology simulation core algorithm R Keller, A Dörr, A Tabira, A Funahashi, MJ Ziller, R Adams, N Rodriguez, ... BMC systems biology 7, 1-16, 2013 | 47 | 2013 |
| Coordinating role of RXRα in downregulating hepatic detoxification during inflammation revealed by fuzzy-logic modeling R Keller, M Klein, M Thomas, A Dräger, U Metzger, MF Templin, TO Joos, ... PLoS computational biology 12 (1), e1004431, 2016 | 41 | 2016 |
| SBMLsqueezer 2: context-sensitive creation of kinetic equations in biochemical networks A Dräger, DC Zielinski, R Keller, M Rall, J Eichner, BO Palsson, A Zell BMC systems biology 9, 1-17, 2015 | 31 | 2015 |
| SBMLsimulator: a Java tool for model simulation and parameter estimation in systems biology A Dörr, R Keller, A Zell, A Dräger Computation 2 (4), 246-257, 2014 | 16 | 2014 |
| JSBML: a flexible and entirely Java-based library for working with SBML A Jouraku, N Le Novère, A Zell, M Hucka, N Rodriguez, M Dumousseau, ... Nature precedings, 1-1, 2011 | 1 | 2011 |
| Simulation and optimization of logical and kinetic biochemical models R Keller Universität Tübingen, 2016 | | 2016 |
| Andreas Dräger July 16, 2014 A Dörr, R Keller, A Zell | | 2014 |
| Path2Models: large-scale generation of computational models from biochemical pathway maps F Wrzodek Deutsche Nationalbibliothek, 2013 | | 2013 |
| Modelling IL-6-mediated regulation of ADME genes R Keller, M Klein, M Thomas, U Metzger, MF Templin, TO Joos, ... | | 2011 |
| The algorithms of SBMLsqueezer A Dräger, DC Zielinski, R Keller, M Rall, J Eichner, BO Palsson, A Zell | | |
| rarbeit G der Parameterschätzung, F Bar, R Keller | | |
| rarbeit R Keller | | |
| rarbeit S Tscherneck, R Keller | | |
| Optimierung und Simulation logischer Modelle im SBMLsimulator M auch die Simulation, R Keller | | |
| Modeling and simulating the effects of atorvastatin on the central carbon metabolism of rat hepatocytes using SBMLsimulator A Dräger, U Hofmann, R Keller, S Tscherneck, B Kandel, M Thomas, ... | | |
| SBMLsqueezer 2.1 A Dräger, DC Zielinski, R Keller, M Rall, J Eichner, BO Palsson, A Zell | | |
