Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ... Nature biotechnology 37 (8), 852-857, 2019 | 17560 | 2019 |
Rarefaction, alpha diversity, and statistics AD Willis Frontiers in Microbiology 10, 2407, 2019 | 704 | 2019 |
Community-led, integrated, reproducible multi-omics with anvi’o AM Eren, E Kiefl, A Shaiber, I Veseli, SE Miller, MS Schechter, I Fink, ... Nature Microbiology 6 (1), 3-6, 2021 | 640 | 2021 |
Consistent and correctable bias in metagenomic sequencing experiments MR McLaren, AD Willis, BJ Callahan Elife 8, e46923, 2019 | 406 | 2019 |
Modeling microbial abundances and dysbiosis with beta-binomial regression BD Martin, D Witten, AD Willis Annals of Applied Statistics 14 (1), 94-115, 2020 | 315 | 2020 |
Influencing the tumor microenvironment: A phase II study of copper depletion using tetrathiomolybdate in patients with breast cancer at high risk for recurrence and in … N Chan, A Willis, N Kornhauser, MM Ward, SB Lee, E Nackos, BR Seo, ... Clinical Cancer Research 23 (3), 666-676, 2017 | 201 | 2017 |
Estimating diversity via frequency ratios A Willis, J Bunge Biometrics 71 (4), 1042-1049, 2015 | 190 | 2015 |
Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome A Shaiber, AD Willis, TO Delmont, S Roux, LX Chen, AC Schmid, ... Genome biology 21, 1-35, 2020 | 182 | 2020 |
Estimating diversity in networked ecological communities AD Willis, BD Martin Biostatistics 23 (1), 207-222, 2022 | 122 | 2022 |
Improved detection of changes in species richness in high diversity microbial communities A Willis, J Bunge, T Whitman Journal of the Royal Statistical Society: Series C (Applied Statistics) 66 …, 2017 | 118 | 2017 |
A distinct Fusobacterium nucleatum clade dominates the colorectal cancer niche M Zepeda-Rivera, SS Minot, H Bouzek, H Wu, A Blanco-Míguez, ... Nature 628 (8007), 424-432, 2024 | 117 | 2024 |
Estimating the number of species in microbial diversity studies J Bunge, A Willis, F Walsh Annual Review of Statistics and Its Application 1, 427-445, 2014 | 113 | 2014 |
Segment number threshold determines juvenile onset of germline cluster expansion in Platynereis dumerilii E Kuehn, DS Clausen, RW Null, BM Metzger, AD Willis, BD Özpolat Journal of Experimental Zoology Part B: Molecular and Developmental …, 2022 | 80 | 2022 |
Follicle number, not assessments of the ovarian stroma, represents the best ultrasonographic marker of polycystic ovary syndrome JP Christ, AD Willis, ED Brooks, HV Brink, BY Jarrett, RA Pierson, ... Fertility and sterility 101 (1), 280-287. e1, 2014 | 76 | 2014 |
Lifetime mobility of an Arctic woolly mammoth MJ Wooller, C Bataille, P Druckenmiller, GM Erickson, P Groves, ... Science 373 (6556), 806-808, 2021 | 66 | 2021 |
Genomic and functional characterization of a mucosal symbiont involved in early-stage colorectal cancer MC Kordahi, IB Stanaway, M Avril, D Chac, MP Blanc, B Ross, C Diener, ... Cell Host & Microbe 29 (10), 1589-1598. e6, 2021 | 60 | 2021 |
Nonstandard regular variation of in-degree and out-degree in the preferential attachment model G Samorodnitsky, S Resnick, D Towsley, R Davis, A Willis, P Wan Journal of Applied Probability 53 (1), 146-161, 2016 | 56 | 2016 |
Continental igneous rock composition: A major control of past global chemical weathering CP Bataille, A Willis, X Yang, XM Liu Science advances 3 (3), e1602183, 2017 | 54 | 2017 |
Confidence sets for phylogenetic trees A Willis Journal of the American Statistical Association 114 (525), 235-244, 2019 | 50 | 2019 |
Clustering co-abundant genes identifies components of the gut microbiome that are reproducibly associated with colorectal cancer and inflammatory bowel disease SS Minot, AD Willis Microbiome 7 (1), 110, 2019 | 47 | 2019 |