Timothy G Vaughan

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Tanja StadlerETH ZurichPatvirtintas el. paštas env.ethz.ch
Alexei J. DrummondProfessor of Computational Biology, University of AucklandPatvirtintas el. paštas cs.auckland.ac.nz
Denise KühnertRobert Koch InstitutPatvirtintas el. paštas rki.de
Joëlle Barido-SottaniIBENS, CNRS, ENS PSLPatvirtintas el. paštas bio.ens.psl.eu
Joseph HeledAuckland UniversityPatvirtintas el. paštas cs.auckland.ac.nz
Remco BouckaertPatvirtintas el. paštas cs.auckland.ac.nz
David A RasmussenNorth Carolina State UniversityPatvirtintas el. paštas ncsu.edu
Sebastian DucheneInstitut Pasteur, Paris, FrancePatvirtintas el. paštas pasteur.fr
Nicola Felix MüllerUniviersity of California San FranciscoPatvirtintas el. paštas ucsf.edu
Andrew RambautProfessor of Molecular Evolution, University of EdinburghPatvirtintas el. paštas ed.ac.uk
Dong XieDepartment of Computer Science, University of AucklandPatvirtintas el. paštas cs.auckland.ac.nz
Marc A. SuchardProfessor, University of California, Los AngelesPatvirtintas el. paštas ucla.edu
Chieh-Hsi WuLecturer in Statistics, University of SouthamptonPatvirtintas el. paštas soton.ac.uk
Louis du PlessisUniversity of OxfordPatvirtintas el. paštas zoo.ox.ac.uk
Peter D. DrummondProfessor of Theoretical Physics, Swinburne University of TechnologyPatvirtintas el. paštas swin.edu.au
Huw Alexander OgilvieMD Anderson Cancer CenterPatvirtintas el. paštas mdanderson.org
Alexandra "Sasha" GavryushkinaResearch fellow at Canterbury UniversityPatvirtintas el. paštas canterbury.ac.nz
Chi ZhangInstitute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of SciencesPatvirtintas el. paštas ivpp.ac.cn
Fábio Kuriki MendesAssistant Professor, Louisiana State UniversityPatvirtintas el. paštas lsu.edu
Sarah NadeauPhD Student, ETH ZurichPatvirtintas el. paštas bsse.ethz.ch

Stebėti

Timothy G Vaughan

Department of Biosystems Science and Engineering, ETH Zürich, Switzerland

Patvirtintas el. paštas bsse.ethz.ch

Phylogenetics Phylodynamics Bayesian Statistics Computational Biology


Pavadinimas Rūšiuoti pagal šaltinius Rūšiuoti pagal metus Rūšiuoti pagal pavadinimą	Cituota Cituota	Metai
BEAST 2: a software platform for Bayesian evolutionary analysis R Bouckaert, J Heled, D Kühnert, T Vaughan, CH Wu, D Xie, MA Suchard, ... PLoS computational biology 10 (4), e1003537, 2014	6693	2014
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis R Bouckaert, TG Vaughan, J Barido-Sottani, S Duchêne, M Fourment, ... PLoS computational biology 15 (4), e1006650, 2019	3543	2019
Ending the neglect to attain the Sustainable Development Goals: a road map for neglected tropical diseases 2021–2030 World Health Organization Ending the neglect to attain the sustainable development goals: a road map …, 2020	1395*	2020
Spread of a SARS-CoV-2 variant through Europe in the summer of 2020 EB Hodcroft, M Zuber, S Nadeau, TG Vaughan, KHD Crawford, ... Nature 595 (7869), 707-712, 2021	628	2021
Phylodynamics with migration: a computational framework to quantify population structure from genomic data D Kühnert, T Stadler, TG Vaughan, AJ Drummond Molecular biology and evolution 33 (8), 2102-2116, 2016	174	2016
Efficient Bayesian inference under the structured coalescent TG Vaughan, D Kühnert, A Popinga, D Welch, AJ Drummond Bioinformatics 30 (16), 2272-2279, 2014	154	2014
Simultaneous reconstruction of evolutionary history and epidemiological dynamics from viral sequences with the birth–death SIR model D Kühnert, T Stadler, TG Vaughan, AJ Drummond Journal of the Royal Society Interface 11 (94), 20131106, 2014	140	2014
IcyTree: rapid browser-based visualization for phylogenetic trees and networks TG Vaughan Bioinformatics 33 (15), 2392-2394, 2017	126	2017
Taming the BEAST—a community teaching material resource for BEAST 2 J Barido-Sottani, V Bošková, LD Plessis, D Kühnert, C Magnus, V Mitov, ... Systematic biology 67 (1), 170-174, 2018	119	2018
A Bayesian model predicts the response of axons to molecular gradients D Mortimer, J Feldner, T Vaughan, I Vetter, Z Pujic, WJ Rosoff, K Burrage, ... Proceedings of the National Academy of Sciences 106 (25), 10296-10301, 2009	116	2009
The origin and early spread of SARS-CoV-2 in Europe SA Nadeau, TG Vaughan, J Scire, JS Huisman, T Stadler Proceedings of the National Academy of Sciences 118 (9), e2012008118, 2021	115	2021
Einstein-Podolsky-Rosen entanglement strategies in two-well Bose-Einstein condensates QY He, MD Reid, TG Vaughan, C Gross, M Oberthaler, PD Drummond Physical review letters 106 (12), 120405, 2011	107	2011
Axon guidance by growth-rate modulation D Mortimer, Z Pujic, T Vaughan, AW Thompson, J Feldner, I Vetter, ... Proceedings of the National Academy of Sciences 107 (11), 5202-5207, 2010	84	2010
Reproductive number of the COVID-19 epidemic in Switzerland with a focus on the Cantons of Basel-Stadt and Basel-Landschaft J Scire, SA Nadeau, TG Vaughan, B Gavin, S Fuchs, J Sommer, KN Koch, ... Swiss medical weekly 150 (19-20), w20271, 2020	78	2020
A stochastic simulator of birth–death master equations with application to phylodynamics TG Vaughan, AJ Drummond Molecular biology and evolution 30 (6), 1480-1493, 2013	73	2013
A multitype birth–death model for Bayesian inference of lineage-specific birth and death rates J Barido-Sottani, TG Vaughan, T Stadler Systematic biology 69 (5), 973-986, 2020	69	2020
Inferring ancestral recombination graphs from bacterial genomic data TG Vaughan, D Welch, AJ Drummond, PJ Biggs, T George, NP French Genetics 205 (2), 857-870, 2017	56	2017
Estimating epidemic incidence and prevalence from genomic data TG Vaughan, GE Leventhal, DA Rasmussen, AJ Drummond, D Welch, ... Molecular Biology and Evolution, msz106, 2019	54	2019
Bayesian inference of reassortment networks reveals fitness benefits of reassortment in human influenza viruses NF Müller, U Stolz, G Dudas, T Stadler, TG Vaughan Proceedings of the National Academy of Sciences 117 (29), 17104-17111, 2020	51	2020
Genetic diversity loss in a biodiversity hotspot: ancient DNA quantifies genetic decline and former connectivity in a critically endangered marsupial C Pacioni, H Hunt, ME Allentoft, TG Vaughan, AF Wayne, A Baynes, ... Molecular Ecology 24 (23), 5813-5828, 2015	50	2015

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