| Mouse embryonic stem cells self-organize into trunk-like structures with neural tube and somites JV Veenvliet, A Bolondi, H Kretzmer, L Haut, M Scholze-Wittler, D Schifferl, ... Science 370 (6522), eaba4937, 2020 | 282 | 2020 |
| In vivo dissection of a clustered-CTCF domain boundary reveals developmental principles of regulatory insulation C Anania, RD Acemel, J Jedamzick, A Bolondi, G Cova, N Brieske, ... Nature genetics 54 (7), 1026-1036, 2022 | 60 | 2022 |
| A CLK3-HMGA2 alternative splicing axis impacts human hematopoietic stem cell molecular identity throughout development M Cesana, MH Guo, D Cacchiarelli, L Wahlster, J Barragan, S Doulatov, ... Cell Stem Cell 22 (4), 575-588. e7, 2018 | 58 | 2018 |
| Spatiotemporal transcriptomic maps of whole mouse embryos at the onset of organogenesis A Sampath Kumar, L Tian, A Bolondi, AA Hernández, R Stickels, ... Nature Genetics 55 (7), 1176-1185, 2023 | 31 | 2023 |
| Hypoxia induces an early primitive streak signature, enhancing spontaneous elongation and lineage representation in gastruloids N López-Anguita, SI Gassaloglu, M Stötzel, A Bolondi, D Conkar, M Typou, ... Development 149 (20), dev200679, 2022 | 22 | 2022 |
| Topological isolation of developmental regulators in mammalian genomes HJ Wu, A Landshammer, EK Stamenova, A Bolondi, H Kretzmer, ... Nature Communications 12 (1), 4897, 2021 | 21 | 2021 |
| Emergence and patterning dynamics of mouse-definitive endoderm M Pour, AS Kumar, N Farag, A Bolondi, H Kretzmer, M Walther, L Wittler, ... Iscience 25 (1), 2022 | 20 | 2022 |
| Dynamic antagonism between key repressive pathways maintains the placental epigenome R Weigert, S Hetzel, N Bailly, C Haggerty, IA Ilik, PYK Yung, C Navarro, ... Nature Cell Biology 25 (4), 579-591, 2023 | 14 | 2023 |
| Reconstructing axial progenitor field dynamics in mouse stem cell-derived embryoids A Bolondi, BK Law, H Kretzmer, SI Gassaloglu, R Buschow, ... Developmental cell 59 (12), 1489-1505. e14, 2024 | 10 | 2024 |
| Integrated molecular-phenotypic profiling reveals metabolic control of morphological variation in stembryos A Villaronga Luque, R Savill, N López-Anguita, A Bolondi, S Garai, ... bioRxiv, 2023.12. 04.569921, 2023 | 10 | 2023 |
| Generation of mouse pluripotent stem cell-derived trunk-like structures: an in vitro model of post-implantation embryogenesis A Bolondi, L Haut, SI Gassaloglu, P Burton, H Kretzmer, R Buschow, ... Bio-protocol 11 (11), e4042-e4042, 2021 | 9 | 2021 |
| Single-cell technologies: a new lens into epigenetic regulation in development A Bolondi, H Kretzmer, A Meissner Current Opinion in Genetics & Development 76, 101947, 2022 | 6 | 2022 |
| What is a gene? A two sided view A Bolondi, F Caldarelli, F Di Felice, D Durano, G Germani, L Michetti, ... Evolutionary Biology 44, 1-4, 2017 | 4 | 2017 |
| Extraembryonic gut endoderm cells undergo programmed cell death during development J Batki, S Hetzel, D Schifferl, A Bolondi, M Walther, L Wittler, ... Nature Cell Biology 26 (6), 868-877, 2024 | 3 | 2024 |
| T-REX17 is a transiently expressed non-coding RNA essential for human endoderm formation A Landshammer, A Bolondi, H Kretzmer, C Much, R Buschow, A Rose, ... ELife 12, e83077, 2023 | 2* | 2023 |
| Inferring cell differentiation maps from lineage tracing data P Sashittal, RY Zhang, BK Law, A Strzalkowski, H Schmidt, A Bolondi, ... bioRxiv, 2024 | 1 | 2024 |
| Generation and molecular characterization of mouse embryonic stem cells derived Trunk-Like Structures A Bolondi | | 2022 |