| Genetic consequences of the transatlantic slave trade in the Americas SJ Micheletti, K Bryc, SGA Esselmann, WA Freyman, ME Moreno, ... The American Journal of Human Genetics, 2020 | 155 | 2020 |
| Spatial phylogenetics of the native California flora AH Thornhill, BG Baldwin, WA Freyman, S Nosratinia, MM Kling, ... BMC Biology 15 (1), 96, 2017 | 145 | 2017 |
| The genetic architecture of depression in individuals of East Asian ancestry: a genome-wide association study O Giannakopoulou, K Lin, X Meng, MH Su, PH Kuo, RE Peterson, ... JAMA psychiatry 78 (11), 1258-1269, 2021 | 144 | 2021 |
| The Universal Floristic Quality Assessment (FQA) Calculator: an online tool for ecological assessment and monitoring WA Freyman, LA Masters, S Packard Methods in Ecology and Evolution 7 (3), 380–383, 2016 | 116 | 2016 |
| Spatial phylogenetics of the vascular flora of Chile RA Scherson, AH Thornhill, R Urbina-Casanova, WA Freyman, ... Molecular Phylogenetics and Evolution 112, 88-95, 2017 | 114 | 2017 |
| Retracing the Hawaiian silversword radiation despite phylogenetic, biogeographic, and paleogeographic uncertainty MJ Landis, WA Freyman, BG Baldwin Evolution 72 (11), 2343-2359, 2018 | 107 | 2018 |
| Cladogenetic and anagenetic models of chromosome number evolution: a Bayesian model averaging approach WA Freyman, S Höhna Systematic Biology 67 (2), 195-215, 2018 | 95 | 2018 |
| Multi-ancestry genome-wide association meta-analysis of Parkinson’s disease JJ Kim, D Vitale, DV Otani, MM Lian, K Heilbron, H Iwaki, J Lake, ... Nature genetics 56 (1), 27-36, 2024 | 84 | 2024 |
| Species richness and endemism in the native flora of California BG Baldwin, AH Thornhill, WA Freyman, DD Ackerly, MM Kling, ... American Journal of Botany 104 (3), 487-501, 2017 | 82 | 2017 |
| Interaction among ploidy, breeding system and lineage diversification R Zenil‐Ferguson, JG Burleigh, WA Freyman, B Igić, I Mayrose, ... New Phytologist 224 (3), 1252-1265, 2019 | 70 | 2019 |
| RevGadgets: An R package for visualizing Bayesian phylogenetic analyses from RevBayes CM Tribble, WA Freyman, MJ Landis, JY Lim, J Barido-Sottani, ... Methods in Ecology and Evolution 13 (2), 314-323, 2022 | 68 | 2022 |
| Stochastic character mapping of state-dependent diversification reveals the tempo of evolutionary decline in self-compatible lineages WA Freyman, S Höhna Systematic Biology 68 (3), 505-519, 2019 | 58 | 2019 |
| A Bayesian approach for estimating branch-specific speciation and extinction rates S Höhna, WA Freyman, Z Nolen, JP Huelsenbeck, MR May, BR Moore bioRxiv, 2019 | 56* | 2019 |
| Fast and robust identity-by-descent inference with the templated positional Burrows-Wheeler transform WA Freyman, KF McManus, SS Shringarpure, EM Jewett, K Bryc, A Auton Molecular Biology and Evolution, 2020 | 40 | 2020 |
| SUMAC: constructing phylogenetic supermatrices and assessing partially decisive taxon coverage WA Freyman Evolutionary Bioinformatics 11, 263-266, 2015 | 32 | 2015 |
| homologizer: Phylogenetic phasing of gene copies into polyploid subgenomes WA Freyman, MG Johnson, CJ Rothfels Methods in Ecology and Evolution 14 (5), 1230–1244, 2023 | 29 | 2023 |
| Prevalence of alpha-1 antitrypsin deficiency, self-reported behavior change, and health care engagement among direct-to-consumer recipients of a personalized genetic risk report JR Ashenhurst, H Nhan, JF Shelton, S Wu, JY Tung, SL Elson, JK Stoller, ... Chest 161 (2), 373-381, 2022 | 24 | 2022 |
| Pleistocene radiation of the serpentine-adapted genus Hesperolinon and other divergence times in Linaceae (Malpighiales) AC Schneider, WA Freyman, CM Guilliams, YP Springer, BG Baldwin American Journal of Botany 103 (2), 221-232, 2016 | 20 | 2016 |
| MUSSEL: Enhanced Bayesian polygenic risk prediction leveraging information across multiple ancestry groups J Jin, J Zhan, J Zhang, R Zhao, J O’Connell, Y Jiang, S Aslibekyan, ... Cell Genomics 4 (4), 2024 | 18 | 2024 |
| Multi-trait genetic analysis identifies autoimmune loci associated with cutaneous melanoma UE Liyanage, S MacGregor, DT Bishop, J Shi, J An, JS Ong, X Han, ... Journal of Investigative Dermatology 142 (6), 1607-1616, 2022 | 18 | 2022 |
