| Evolutionary processes of diversification in a model island archipelago RM Brown, CD Siler, CH Oliveros, JA Esselstyn, AC Diesmos, PA Hosner, ... Annual Review of Ecology, Evolution, and Systematics 44 (1), 411-435, 2013 | 277 | 2013 |
| The challenge of species delimitation at the extremes: diversification without morphological change in Philippine sun skinks AJ Barley, J White, AC Diesmos, RM Brown Evolution 67 (12), 3556-3572, 2013 | 167 | 2013 |
| Fourteen nuclear genes provide phylogenetic resolution for difficult nodes in the turtle tree of life AJ Barley, PQ Spinks, RC Thomson, HB Shaffer Molecular Phylogenetics and Evolution 55 (3), 1189-1194, 2010 | 120 | 2010 |
| Impact of model violations on the inference of species boundaries under the multispecies coalescent AJ Barley, JM Brown, RC Thomson Systematic Biology 67 (2), 269-284, 2018 | 98 | 2018 |
| Phylogenomics and species delimitation in the knob-scaled lizards of the genus Xenosaurus (Squamata: Xenosauridae) using ddRADseq data reveal a substantial underestimation of … ANM de Oca, AJ Barley, RN Meza-Lázaro, UO García-Vázquez, ... Molecular Phylogenetics and Evolution 106, 241-253, 2017 | 91 | 2017 |
| Variation across mitochondrial gene trees provides evidence for systematic error: how much gene tree variation is biological? EJ Richards, JM Brown, AJ Barley, RA Chong, RC Thomson Systematic biology 67 (5), 847-860, 2018 | 69 | 2018 |
| Habitat structure directly affects aggression in convict cichlids Archocentrus nigrofasciatus AJ Barley, RM Coleman Current Zoology 56 (1), 52-56, 2010 | 51 | 2010 |
| Sun skink landscape genomics: assessing the roles of micro‐evolutionary processes in shaping genetic and phenotypic diversity across a heterogeneous and fragmented landscape AJ Barley, PJ Monnahan, RC Thomson, LL Grismer, RM Brown Molecular Ecology 24 (8), 1696-1712, 2015 | 50 | 2015 |
| Complex patterns of hybridization and introgression across evolutionary timescales in Mexican whiptail lizards (Aspidoscelis) AJ Barley, ANM de Oca, TW Reeder, NL Manríquez-Morán, JCA Monroy, ... Molecular Phylogenetics and Evolution 132, 284-295, 2019 | 49 | 2019 |
| Sun skink diversification across the Indian–Southeast Asian biogeographical interface AJ Barley, A Datta‐Roy, KP Karanth, RM Brown Journal of Biogeography 42 (2), 292-304, 2015 | 47 | 2015 |
| Assessing the performance of DNA barcoding using posterior predictive simulations AJ Barley, RC Thomson Molecular ecology 25 (9), 1944-1957, 2016 | 46 | 2016 |
| Model-based species delimitation: are coalescent species reproductively isolated? LC Campillo, AJ Barley, RC Thomson Systematic Biology 69 (4), 708-721, 2020 | 42 | 2020 |
| Conservation genetics of the Philippine tarsier: cryptic genetic variation restructures conservation priorities for an island archipelago primate RM Brown, JA Weghorst, KV Olson, MRM Duya, AJ Barley, MV Duya, ... PLoS One 9 (8), e104340, 2014 | 42 | 2014 |
| Same-same, but different”: an unusual new species of the Limnonectes kuhlii complex from West Sumatra (Anura: Dicroglossidae) DS Mcleod, SJ Horner, C Husted, A Barley, D Iskandar Zootaxa 2883 (1), 52-64, 2011 | 39 | 2011 |
| Conservation status of the world's skinks (Scincidae): Taxonomic and geographic patterns in extinction risk DG Chapple, U Roll, M Böhm, R Aguilar, AP Amey, CC Austin, M Baling, ... Biological Conservation 257, 109101, 2021 | 37 | 2021 |
| Phylogeography of a widespread lizard complex reflects patterns of both geographic and ecological isolation LN Gray, AJ Barley, S Poe, RC Thomson, A Nieto‐Montes de Oca, ... Molecular Ecology 28 (3), 644-657, 2019 | 36 | 2019 |
| The evolutionary network of whiptail lizards reveals predictable outcomes of hybridization AJ Barley, A Nieto-Montes de Oca, NL Manríquez-Morán, RC Thomson Science 377 (6607), 773-777, 2022 | 30 | 2022 |
| A new diploid parthenogenetic whiptail lizard from Sonora, Mexico, is the “missing link” in the evolutionary transition to polyploidy AJ Barley, TW Reeder, A Nieto-Montes de Oca, CJ Cole, RC Thomson The American Naturalist 198 (2), 295-309, 2021 | 30 | 2021 |
| Phylogenetic relationships and biogeographic range evolution in cat-eyed snakes, Boiga (Serpentes: Colubridae) JL Weinell, AJ Barley, CD Siler, NL Orlov, NB Ananjeva, JR Oaks, ... Zoological Journal of the Linnean Society 192 (1), 169-184, 2021 | 30 | 2021 |
| “SAME-SAME BUT DIFFERENT”: ANOTHER NEW SPECIES DS McLeod, JK Kelly, A Barley Russian Journal of Herpetology 19 (3), 261-274, 2012 | 27 | 2012 |