Generalized biomolecular modeling and design with RoseTTAFold All-Atom R Krishna, J Wang, W Ahern, P Sturmfels, P Venkatesh, I Kalvet, GR Lee, ... Science 384 (6693), eadl2528, 2024 | 389 | 2024 |
Massively parallel fitness profiling reveals multiple novel enzymes in Pseudomonas putida lysine metabolism. MG Thompson, JM Blake-Hedges, P Cruz-Morales, JF Barajas, ... mBio 10: e02577-18, 2019 | 70 | 2019 |
Functional analysis of the fatty acid and alcohol metabolism of Pseudomonas putida using RB-TnSeq MG Thompson, MR Incha, AN Pearson, M Schmidt, WA Sharpless, ... BioRxiv, 2020.07. 04.188060, 2020 | 67* | 2020 |
Robust Characterization of Two Distinct Glutarate Sensing Transcription Factors of Pseudomonas putida l-Lysine Metabolism MG Thompson, Z Costello, NFC Hummel, P Cruz-Morales, ... ACS Synthetic Biology 8 (10), 2385-2396, 2019 | 24 | 2019 |
Structural mechanism of regioselectivity in an unusual bacterial acyl-CoA dehydrogenase JM Blake-Hedges, JH Pereira, P Cruz-Morales, MG Thompson, ... Journal of the American Chemical Society 142 (2), 835-846, 2019 | 14 | 2019 |
Glutarate metabolism in Pseudomonas putida is regulated by two distinct glutarate sensing transcription factors MG Thompson, P Cruz-Morales, RN Krishna, JM Blake-Hedges, ... | 8 | 2019 |
Generalized biomolecular modeling and design with rosettafold all-atom. bioRxiv (2023) R Krishna, J Wang, W Ahern, P Sturmfels, P Venkatesh, I Kalvet, GR Lee, ... Cited on, 20, 0 | 8 | |
Computational design of serine hydrolases A Lauko, SJ Pellock, KH Sumida, I Anishchenko, D Juergens, W Ahern, ... Science, eadu2454, 2025 | 5 | 2025 |
Modeling protein-small molecule conformational ensembles with ChemNet I Anishchenko, Y Kipnis, I Kalvet, G Zhou, R Krishna, SJ Pellock, A Lauko, ... bioRxiv, 2024 | 1 | 2024 |
Correction for Thompson et al.,“Fatty Acid and Alcohol Metabolism in Pseudomonas putida: Functional Analysis Using Random Barcode Transposon Sequencing” MG Thompson, MR Incha, AN Pearson, M Schmidt, WA Sharpless, ... Applied and Environmental Microbiology 87 (8), e00177-21, 2021 | | 2021 |
Robust characterization of two distinct glutarate sensing transcription factors found in Pseudomonas putida L-lysine metabolism MG Thompson, Z Costello, NFC Hummel, P Cruz-Morales, ... bioRxiv, 557751, 2019 | | 2019 |
Investigating the regiochemistry of an unusual bacterial Acyl-CoA dehydrogenase J Blake-Hedges, JH Pereira, J Chen, R Krishna, L Chan, CJ Petzold, ... Natural Product Discovery and Development in the Genomic Era, 2018 | | 2018 |
Development of Streptomyces as heterologous hosts for the production of branched fatty acids for biofuels R Krishna, J Blake-Hedges, R Haushalter, J Keasling ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 253, 2017 | | 2017 |