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Yun Deng
Yun Deng
Graduate student, UC Berkeley
Geverifieerd e-mailadres voor berkeley.edu
Titel
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Jaar
Decoding topologically associating domains with ultra-low resolution Hi-C data by graph structural entropy
A Li, X Yin, B Xu, D Wang, J Han, Y Wei, Y Deng, Y Xiong, Z Zhang
Nature communications 9 (1), 3265, 2018
1012018
Evaluation of methods for estimating coalescence times using ancestral recombination graphs
D YC Brandt, X Wei, Y Deng, AH Vaughn, R Nielsen
Genetics 221 (1), iyac044, 2022
412022
The distribution of waiting distances in ancestral recombination graphs
Y Deng, YS Song, R Nielsen
Theoretical Population Biology 141, 34-43, 2021
302021
Robust and accurate Bayesian inference of genome-wide genealogies for large samples
Y Deng, R Nielsen, YS Song
bioRxiv, 2024.03. 16.585351, 2024
172024
Inference and applications of ancestral recombination graphs
R Nielsen, AH Vaughn, Y Deng
Nature Reviews Genetics 26 (1), 47-58, 2025
112025
CherryML: scalable maximum likelihood estimation of phylogenetic models
S Prillo, Y Deng, P Boyeau, X Li, PY Chen, YS Song
Nature methods 20 (8), 1232-1236, 2023
82023
A previously reported bottleneck in human ancestry 900 kya is likely a statistical artifact
Y Deng, R Nielsen, YS Song
Genetics 229 (1), iyae192, 2025
22025
The distribution of waiting distances in ancestral recombination graphs and its applications
Y Deng, YS Song, R Nielsen
bioRxiv, 2020.12. 24.424361, 2020
22020
A General Framework for Branch Length Estimation in Ancestral Recombination Graphs
Y Deng, YS Song, R Nielsen
bioRxiv, 2025.02. 14.638385, 2025
2025
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Artikelen 1–9