| MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020 | 417 | 2020 |
| BioModels—15 years of sharing computational models in life science RS Malik-Sheriff, M Glont, TVN Nguyen, K Tiwari, MG Roberts, A Xavier, ... Nucleic acids research 48 (D1), D407-D415, 2020 | 375 | 2020 |
| SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 2020 | 254 | 2020 |
| The systems biology markup language (SBML): language specification for level 3 version 2 core release 2 M Hucka, FT Bergmann, C Chaouiya, A Dräger, S Hoops, SM Keating, ... Journal of integrative bioinformatics 16 (2), 20190021, 2019 | 119 | 2019 |
| Reproducibility in systems biology modelling K Tiwari, S Kananathan, MG Roberts, JP Meyer, MU Sharif Shohan, ... Molecular systems biology 17 (2), e9982, 2021 | 116 | 2021 |
| BioModels: expanding horizons to include more modelling approaches and formats M Glont, TVN Nguyen, M Graesslin, R Hälke, R Ali, J Schramm, ... Nucleic Acids Research 46 (D1), D1248-D1253, 2018 | 104 | 2018 |
| Positive feedback keeps duration of mitosis temporally insulated from upstream cell-cycle events AR Araujo, L Gelens, RSM Sheriff, SDM Santos Molecular cell 64 (2), 362-375, 2016 | 97 | 2016 |
| Building digital twins of the human immune system: toward a roadmap R Laubenbacher, A Niarakis, T Helikar, G An, B Shapiro, RS Malik-Sheriff, ... NPJ digital medicine 5 (1), 64, 2022 | 94 | 2022 |
| The european bioinformatics institute (EMBL-EBI) in 2021 G Cantelli, A Bateman, C Brooksbank, AI Petrov, RS Malik-Sheriff, ... Nucleic Acids Research 50 (D1), D11-D19, 2022 | 71 | 2022 |
| GATA3 mediates a fast, irreversible commitment to BMP4-driven differentiation in human embryonic stem cells A Gunne-Braden, A Sullivan, B Gharibi, RSM Sheriff, A Maity, YF Wang, ... Cell stem cell 26 (5), 693-706. e9, 2020 | 65 | 2020 |
| Memote: A community driven effort towards a standardized genome-scale metabolic model test suite C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... BioRxiv, 350991, 2018 | 59 | 2018 |
| Best practices to maximize the use and reuse of quantitative and systems pharmacology models: recommendations from the United Kingdom quantitative and systems pharmacology network L Cucurull‐Sanchez, MJ Chappell, V Chelliah, SY Amy Cheung, G Derks, ... CPT: pharmacometrics & systems pharmacology 8 (5), 259-272, 2019 | 53 | 2019 |
| Nonparametric bayesian networks K Ickstadt, B Bornkamp, M Grzegorczyk, J Wieczorek, MR Sheriff, ... Bayesian statistics 9, 283-316, 2010 | 48 | 2010 |
| The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE) D Waltemath, M Golebiewski, ML Blinov, P Gleeson, H Hermjakob, ... Journal of integrative bioinformatics 17 (2-3), 20200005, 2020 | 36 | 2020 |
| BioSimulators: a central registry of simulation engines and services for recommending specific tools B Shaikh, LP Smith, D Vasilescu, G Marupilla, M Wilson, E Agmon, ... Nucleic acids research 50 (W1), W108-W114, 2022 | 26 | 2022 |
| Diverse patterns of molecular changes in the mechano-responsiveness of focal adhesions RS Malik-Sheriff, S Imtiaz, HE Grecco, E Zamir Scientific Reports 8 (1), 2187, 2018 | 22 | 2018 |
| Setting the basis of best practices and standards for curation and annotation of logical models in biology—highlights of the [BC] 2 2019 CoLoMoTo/SysMod Workshop A Niarakis, M Kuiper, M Ostaszewski, RS Malik Sheriff, C Casals-Casas, ... Briefings in bioinformatics 22 (2), 1848-1859, 2021 | 21 | 2021 |
| Community members. 2020. SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 3 | 21 | 3 |
| The use of frailty scoring to predict early physical activity levels after cardiac surgery YS Abdullahi, MY Salmasi, M Moscarelli, A Parlanti, M Marotta, E Varone, ... The Annals of Thoracic Surgery 111 (1), 36-43, 2021 | 14 | 2021 |
| Fabrication of silver nanoparticles with cotton for antibacterial wound dressing MubarakAli, D, ArunKumar, J, R Sheriff, M, Pandiaraj, D, SheikSyedIshack, ... Pharmaceutical Nanotechnology 1 (1), 78-82, 2013 | 13 | 2013 |
Henning HermjakobHead of Molecular Systems, European Bioinformatics Institute (EMBL-EBI)Geverifieerd e-mailadres voor ebi.ac.uk