An evaluation of Hamiltonian Monte Carlo performance to calibrate age-structured compartmental SEIR models to incidence data J Andrade, J Duggan Epidemics 33, 100415, 2020 | 29 | 2020 |
A Bayesian approach to calibrate system dynamics models using Hamiltonian Monte Carlo J Andrade, J Duggan System Dynamics Review 37 (4), 283-309, 2021 | 21 | 2021 |
Inferring the effective reproductive number from deterministic and semi-deterministic compartmental models using incidence and mobility data J Andrade, J Duggan PLOS Computational Biology 18 (6), e1010206, 2022 | 12 | 2022 |
An age-cohort simulation model for generating COVID-19 scenarios: A study from Ireland's pandemic response J Duggan, J Andrade, TB Murphy, JP Gleeson, C Walsh, P Nolan European Journal of Operational Research 313 (1), 343-358, 2024 | 9 | 2024 |
Using system dynamics to support a functional exercise for pandemic preparedness and response C Green, B Beishuizen, M Stein, CP Rovers, A Tostmann, DLK de Jong, ... System Dynamics Review 40 (3), e1786, 2024 | 3 | 2024 |
Anchoring the mean generation time in the SEIR to mitigate biases in ℜ0 estimates due to uncertainty in the distribution of the epidemiological delays J Andrade, J Duggan Royal Society Open Science 10 (8), 230515, 2023 | 3 | 2023 |
Preparing for pandemic response in the context of limited resources J Andrade, B Beishuizen, M Stein, M Connolly, J Duggan System Dynamics Review 40 (3), e1775, 2024 | 2 | 2024 |
Advances in the estimation of the reproduction number from compartmental models using contemporary Monte Carlo methods J Andrade | | 2023 |
Anchoring the mean generation time in the SEIR to mitigate biases in R0 estimates due to uncertainty in the distribution of the epidemiological delays J Andrade, J Duggan bioRxiv, 2023.01. 13.523965, 2023 | | 2023 |
HealthSim: A Management Flight Simulator to Support Resource Collaborative Decision Making for Pandemic Preparedness J Duggan, J Andrade 37th International Conference of the System Dynamics Society, 2019 | | 2019 |